Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC069304.2-201ENST00000605154 435 ntBASIC2.98□□□□□ -1.93
RAB40BQ12829 AL391497.1-201ENST00000608671 547 ntBASIC2.98□□□□□ -1.93
RAB40BQ12829 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.98□□□□□ -1.93
RAB40BQ12829 AL133445.2-201ENST00000611191 527 ntBASIC2.98□□□□□ -1.93
RAB40BQ12829 AL591516.1-201ENST00000611326 274 ntBASIC2.98□□□□□ -1.93
RAB40BQ12829 MIR4509-1-201ENST00000618224 94 ntBASIC2.98□□□□□ -1.93
RAB40BQ12829 PACRG-211ENST00000621363 360 ntTSL 5 BASIC2.98□□□□□ -1.93
RAB40BQ12829 AC004009.2-201ENST00000623016 728 ntBASIC2.98□□□□□ -1.93
RAB40BQ12829 AC095031.1-201ENST00000623685 672 ntBASIC2.98□□□□□ -1.93
RAB40BQ12829 AC010608.3-201ENST00000625048 527 ntBASIC2.98□□□□□ -1.93
RAB40BQ12829 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RAB40BQ12829 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RAB40BQ12829 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.98□□□□□ -1.93
RAB40BQ12829 AL645937.1-201ENST00000641739 1652 ntBASIC2.98□□□□□ -1.93
RAB40BQ12829 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.98□□□□□ -1.93
RAB40BQ12829 AL161912.2-201ENST00000565707 3007 ntBASIC2.98□□□□□ -1.93
RAB40BQ12829 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
RAB40BQ12829 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
RAB40BQ12829 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RAB40BQ12829 AC007256.1-201ENST00000392253 2765 ntBASIC2.97□□□□□ -1.93
RAB40BQ12829 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RAB40BQ12829 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.97□□□□□ -1.93
RAB40BQ12829 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RAB40BQ12829 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
RAB40BQ12829 RNA5SP80-201ENST00000410475 111 ntBASIC2.97□□□□□ -1.93
RAB40BQ12829 RN7SKP159-201ENST00000410657 292 ntBASIC2.97□□□□□ -1.93
RAB40BQ12829 AC068533.2-201ENST00000411872 306 ntBASIC2.97□□□□□ -1.93
RAB40BQ12829 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RAB40BQ12829 MTATP6P20-201ENST00000414147 562 ntBASIC2.97□□□□□ -1.93
RAB40BQ12829 RPS3AP37-201ENST00000419176 745 ntBASIC2.97□□□□□ -1.93
RAB40BQ12829 OR1AA1P-201ENST00000419597 916 ntBASIC2.97□□□□□ -1.93
RAB40BQ12829 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
RAB40BQ12829 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.97□□□□□ -1.93
RAB40BQ12829 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.97□□□□□ -1.93
RAB40BQ12829 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RAB40BQ12829 SDR42E1P3-201ENST00000438345 502 ntBASIC2.97□□□□□ -1.93
RAB40BQ12829 RABEPKP1-201ENST00000440529 1026 ntBASIC2.97□□□□□ -1.93
RAB40BQ12829 EEF1A1P39-201ENST00000440791 250 ntBASIC2.97□□□□□ -1.93
RAB40BQ12829 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.97□□□□□ -1.93
RAB40BQ12829 AL031313.1-201ENST00000448435 256 ntBASIC2.97□□□□□ -1.93
RAB40BQ12829 TRGVB-201ENST00000453257 471 ntBASIC2.97□□□□□ -1.93
RAB40BQ12829 Z82190.1-201ENST00000454534 490 ntBASIC2.97□□□□□ -1.93
RAB40BQ12829 RPL23AP31-201ENST00000456160 467 ntBASIC2.97□□□□□ -1.93
RAB40BQ12829 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.97□□□□□ -1.93
RAB40BQ12829 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.97□□□□□ -1.93
RAB40BQ12829 RPS4XP10-201ENST00000465034 731 ntBASIC2.97□□□□□ -1.93
RAB40BQ12829 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RAB40BQ12829 MTCYBP17-201ENST00000503579 789 ntBASIC2.97□□□□□ -1.93
RAB40BQ12829 COX7A2P2-201ENST00000505291 250 ntBASIC2.97□□□□□ -1.93
RAB40BQ12829 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.97□□□□□ -1.93
RAB40BQ12829 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.97□□□□□ -1.93
RAB40BQ12829 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.97□□□□□ -1.93
RAB40BQ12829 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.97□□□□□ -1.93
RAB40BQ12829 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.97□□□□□ -1.93
RAB40BQ12829 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.97□□□□□ -1.93
RAB40BQ12829 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.97□□□□□ -1.93
RAB40BQ12829 FAM60BP-201ENST00000578364 658 ntBASIC2.97□□□□□ -1.93
RAB40BQ12829 AC091057.3-201ENST00000602684 733 ntBASIC2.97□□□□□ -1.93
RAB40BQ12829 AC006254.3-201ENST00000603353 884 ntBASIC2.97□□□□□ -1.93
RAB40BQ12829 AL160237.3-201ENST00000604114 1013 ntBASIC2.97□□□□□ -1.93
RAB40BQ12829 AL355810.1-201ENST00000614629 552 ntBASIC2.97□□□□□ -1.93
RAB40BQ12829 AL353748.2-201ENST00000622148 471 ntBASIC2.97□□□□□ -1.93
RAB40BQ12829 AC034229.5-201ENST00000624258 185 ntBASIC2.97□□□□□ -1.93
RAB40BQ12829 AC103798.2-201ENST00000624292 632 ntBASIC2.97□□□□□ -1.93
RAB40BQ12829 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.97□□□□□ -1.93
RAB40BQ12829 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.97□□□□□ -1.93
RAB40BQ12829 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
RAB40BQ12829 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.96□□□□□ -1.93
RAB40BQ12829 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RAB40BQ12829 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RAB40BQ12829 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RAB40BQ12829 AL356274.2-201ENST00000624379 3752 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RAB40BQ12829 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
RAB40BQ12829 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
RAB40BQ12829 OR5H2-201ENST00000355273 945 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
RAB40BQ12829 RNA5SP295-201ENST00000362655 121 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 RNA5SP197-201ENST00000363357 119 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.96□□□□□ -1.94
RAB40BQ12829 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RAB40BQ12829 YPEL5P1-201ENST00000419731 367 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 AL137014.1-201ENST00000420490 1226 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.96□□□□□ -1.94
RAB40BQ12829 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC2.96□□□□□ -1.94
RAB40BQ12829 CYCSP4-201ENST00000429682 331 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 AL050321.1-201ENST00000432363 400 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.96□□□□□ -1.94
RAB40BQ12829 MTCYBP31-201ENST00000438855 1122 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.96□□□□□ -1.94
RAB40BQ12829 OR10R1P-201ENST00000441524 1141 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 MTCO2P25-201ENST00000447065 681 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 AC007327.1-201ENST00000447461 264 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 AL359073.1-201ENST00000448036 403 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 AL589880.1-201ENST00000448271 287 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RAB40BQ12829 AC092185.1-201ENST00000491371 97 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 AC023424.2-201ENST00000493479 777 ntBASIC2.96□□□□□ -1.94
RAB40BQ12829 AC090453.1-201ENST00000495560 436 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 199.2 ms