Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
PRKDCP78527 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
PRKDCP78527 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.55□□□□□ -2.16
PRKDCP78527 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.55□□□□□ -2.16
PRKDCP78527 FGF7P3-201ENST00000454645 303 ntBASIC1.55□□□□□ -2.16
PRKDCP78527 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC1.55□□□□□ -2.16
PRKDCP78527 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
PRKDCP78527 HMGB3P26-201ENST00000560051 582 ntBASIC1.55□□□□□ -2.16
PRKDCP78527 AC107871.2-201ENST00000612894 502 ntBASIC1.55□□□□□ -2.16
PRKDCP78527 CU459211.1-201ENST00000635667 749 ntBASIC1.55□□□□□ -2.16
PRKDCP78527 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC1.55□□□□□ -2.16
PRKDCP78527 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.55□□□□□ -2.16
PRKDCP78527 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
PRKDCP78527 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
PRKDCP78527 RPS7P5-201ENST00000441482 581 ntBASIC1.55□□□□□ -2.16
PRKDCP78527 RPS29P12-201ENST00000460178 152 ntBASIC1.55□□□□□ -2.16
PRKDCP78527 RPL23AP63-201ENST00000498752 471 ntBASIC1.55□□□□□ -2.16
PRKDCP78527 RN7SKP60-201ENST00000516985 239 ntBASIC1.55□□□□□ -2.16
PRKDCP78527 OR10D4P-201ENST00000525892 951 ntBASIC1.55□□□□□ -2.16
PRKDCP78527 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC1.55□□□□□ -2.16
PRKDCP78527 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
PRKDCP78527 NR1H5P-201ENST00000452683 1377 ntBASIC1.54□□□□□ -2.16
PRKDCP78527 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
PRKDCP78527 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
PRKDCP78527 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
PRKDCP78527 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.54□□□□□ -2.16
PRKDCP78527 RAC1P3-201ENST00000416129 580 ntBASIC1.54□□□□□ -2.16
PRKDCP78527 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.54□□□□□ -2.16
PRKDCP78527 RNU7-95P-201ENST00000459222 64 ntBASIC1.54□□□□□ -2.16
PRKDCP78527 AC090543.1-201ENST00000492168 485 ntBASIC1.54□□□□□ -2.16
PRKDCP78527 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.54□□□□□ -2.16
PRKDCP78527 MEPE-206ENST00000511670 550 ntTSL 4 BASIC1.54□□□□□ -2.16
PRKDCP78527 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC1.54□□□□□ -2.16
PRKDCP78527 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC1.54□□□□□ -2.16
PRKDCP78527 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
PRKDCP78527 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC1.54□□□□□ -2.16
PRKDCP78527 PROS2P-201ENST00000474651 1951 ntBASIC1.54□□□□□ -2.16
PRKDCP78527 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
PRKDCP78527 EI24P1-201ENST00000416584 867 ntBASIC1.54□□□□□ -2.16
PRKDCP78527 AC234782.4-201ENST00000417646 1048 ntBASIC1.54□□□□□ -2.16
PRKDCP78527 POU5F1P7-201ENST00000508759 541 ntBASIC1.54□□□□□ -2.16
PRKDCP78527 TMEM248P1-201ENST00000510579 951 ntBASIC1.54□□□□□ -2.16
PRKDCP78527 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.54□□□□□ -2.16
PRKDCP78527 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
PRKDCP78527 AC093908.1-201ENST00000623125 8092 ntBASIC1.54□□□□□ -2.16
PRKDCP78527 DCAF13P1-201ENST00000495256 1330 ntBASIC1.54□□□□□ -2.16
PRKDCP78527 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
PRKDCP78527 RPL7P37-201ENST00000425095 738 ntBASIC1.54□□□□□ -2.16
PRKDCP78527 HMGB1P31-201ENST00000437242 427 ntBASIC1.54□□□□□ -2.16
PRKDCP78527 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC1.54□□□□□ -2.16
PRKDCP78527 PSMA3P-201ENST00000555485 635 ntBASIC1.54□□□□□ -2.16
PRKDCP78527 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.54□□□□□ -2.16
PRKDCP78527 AC005951.1-201ENST00000576706 485 ntBASIC1.54□□□□□ -2.16
PRKDCP78527 AL020991.1-201ENST00000612314 373 ntBASIC1.54□□□□□ -2.16
PRKDCP78527 AL606537.1-201ENST00000607258 2011 ntBASIC1.54□□□□□ -2.16
PRKDCP78527 XPOTP1-201ENST00000443317 2398 ntBASIC1.53□□□□□ -2.16
PRKDCP78527 AC107021.2-201ENST00000567714 2095 ntBASIC1.53□□□□□ -2.16
PRKDCP78527 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
PRKDCP78527 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.53□□□□□ -2.16
PRKDCP78527 Y_RNA.191-201ENST00000363972 113 ntBASIC1.53□□□□□ -2.16
PRKDCP78527 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
PRKDCP78527 MTATP6P11-201ENST00000428071 670 ntBASIC1.53□□□□□ -2.16
PRKDCP78527 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC1.53□□□□□ -2.16
PRKDCP78527 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC1.53□□□□□ -2.16
PRKDCP78527 MLLT10P2-201ENST00000506434 249 ntBASIC1.53□□□□□ -2.16
PRKDCP78527 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC1.53□□□□□ -2.16
PRKDCP78527 AC068339.2-201ENST00000534395 618 ntBASIC1.53□□□□□ -2.16
PRKDCP78527 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC1.53□□□□□ -2.16
PRKDCP78527 AC233981.2-201ENST00000611524 1614 ntBASIC1.53□□□□□ -2.16
PRKDCP78527 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.53□□□□□ -2.16
PRKDCP78527 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
PRKDCP78527 RNA5SP502-201ENST00000362694 119 ntBASIC1.53□□□□□ -2.16
PRKDCP78527 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.53□□□□□ -2.16
PRKDCP78527 RPL31P1-201ENST00000398116 372 ntBASIC1.53□□□□□ -2.16
PRKDCP78527 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
PRKDCP78527 AC003989.2-201ENST00000440224 169 ntBASIC1.53□□□□□ -2.16
PRKDCP78527 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC1.53□□□□□ -2.16
PRKDCP78527 MIR5002-201ENST00000584713 97 ntBASIC1.53□□□□□ -2.16
PRKDCP78527 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.53□□□□□ -2.16
PRKDCP78527 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.53□□□□□ -2.16
PRKDCP78527 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
PRKDCP78527 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
PRKDCP78527 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
PRKDCP78527 AL445437.1-201ENST00000623157 3087 ntBASIC1.53□□□□□ -2.16
PRKDCP78527 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
PRKDCP78527 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
PRKDCP78527 RNA5SP296-201ENST00000410523 111 ntBASIC1.53□□□□□ -2.16
PRKDCP78527 SETP10-201ENST00000424368 814 ntBASIC1.53□□□□□ -2.16
PRKDCP78527 AL390023.1-201ENST00000428836 262 ntBASIC1.53□□□□□ -2.16
PRKDCP78527 RPS7P2-201ENST00000435134 607 ntBASIC1.53□□□□□ -2.16
PRKDCP78527 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.53□□□□□ -2.16
PRKDCP78527 AL137159.1-201ENST00000452808 512 ntBASIC1.53□□□□□ -2.16
PRKDCP78527 RPL21P71-201ENST00000465598 459 ntBASIC1.53□□□□□ -2.16
PRKDCP78527 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.53□□□□□ -2.16
PRKDCP78527 RN7SKP40-201ENST00000517211 242 ntBASIC1.53□□□□□ -2.16
PRKDCP78527 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC1.53□□□□□ -2.16
PRKDCP78527 AC135279.1-201ENST00000543493 504 ntBASIC1.53□□□□□ -2.16
PRKDCP78527 AMZ2P1-203ENST00000565833 850 ntBASIC1.53□□□□□ -2.16
PRKDCP78527 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
PRKDCP78527 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC1.53□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms