Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.52□□□□□ -1.85
CDH11P55287 MT-TH-201ENST00000387441 69 ntBASIC3.52□□□□□ -1.85
CDH11P55287 SNORA48.7-201ENST00000391302 135 ntBASIC3.52□□□□□ -1.85
CDH11P55287 SNORA26.8-201ENST00000391306 124 ntBASIC3.52□□□□□ -1.85
CDH11P55287 RN7SKP266-201ENST00000410232 287 ntBASIC3.52□□□□□ -1.85
CDH11P55287 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.52□□□□□ -1.85
CDH11P55287 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.52□□□□□ -1.85
CDH11P55287 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CDH11P55287 AC007742.1-201ENST00000425789 329 ntBASIC3.52□□□□□ -1.85
CDH11P55287 PSMA2P3-201ENST00000429685 675 ntBASIC3.52□□□□□ -1.85
CDH11P55287 AC098826.1-201ENST00000433943 471 ntBASIC3.52□□□□□ -1.85
CDH11P55287 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.52□□□□□ -1.85
CDH11P55287 ELOCP26-201ENST00000436067 329 ntBASIC3.52□□□□□ -1.85
CDH11P55287 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.52□□□□□ -1.85
CDH11P55287 AL512286.1-201ENST00000439244 400 ntBASIC3.52□□□□□ -1.85
CDH11P55287 RPL23AP33-201ENST00000442301 452 ntBASIC3.52□□□□□ -1.85
CDH11P55287 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDH11P55287 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.52□□□□□ -1.85
CDH11P55287 AL590399.6-201ENST00000446396 307 ntBASIC3.52□□□□□ -1.85
CDH11P55287 MTND1P29-201ENST00000448112 647 ntBASIC3.52□□□□□ -1.85
CDH11P55287 ZNF114P1-201ENST00000453500 292 ntBASIC3.52□□□□□ -1.85
CDH11P55287 BX322784.1-201ENST00000455793 1077 ntBASIC3.52□□□□□ -1.85
CDH11P55287 AC092754.2-201ENST00000463506 460 ntBASIC3.52□□□□□ -1.85
CDH11P55287 AC146507.1-201ENST00000468335 354 ntBASIC3.52□□□□□ -1.85
CDH11P55287 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CDH11P55287 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.52□□□□□ -1.85
CDH11P55287 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.52□□□□□ -1.85
CDH11P55287 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CDH11P55287 NDUFB4P9-201ENST00000511646 388 ntBASIC3.52□□□□□ -1.85
CDH11P55287 RNU4-60P-201ENST00000517239 135 ntBASIC3.52□□□□□ -1.85
CDH11P55287 AC023632.4-201ENST00000517783 191 ntBASIC3.52□□□□□ -1.85
CDH11P55287 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.52□□□□□ -1.85
CDH11P55287 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.52□□□□□ -1.85
CDH11P55287 HIGD1AP10-201ENST00000527837 282 ntBASIC3.52□□□□□ -1.85
CDH11P55287 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.52□□□□□ -1.85
CDH11P55287 OR6C7P-201ENST00000547875 934 ntBASIC3.52□□□□□ -1.85
CDH11P55287 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.52□□□□□ -1.85
CDH11P55287 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.52□□□□□ -1.85
CDH11P55287 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.52□□□□□ -1.85
CDH11P55287 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.52□□□□□ -1.85
CDH11P55287 CENPUP2-201ENST00000555897 1186 ntBASIC3.52□□□□□ -1.85
CDH11P55287 AC090877.1-201ENST00000561418 344 ntBASIC3.52□□□□□ -1.85
CDH11P55287 AC034105.4-201ENST00000568304 277 ntBASIC3.52□□□□□ -1.85
CDH11P55287 AP001004.1-201ENST00000582468 324 ntBASIC3.52□□□□□ -1.85
CDH11P55287 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.52□□□□□ -1.85
CDH11P55287 AC008507.1-201ENST00000587506 734 ntBASIC3.52□□□□□ -1.85
CDH11P55287 AC005255.1-201ENST00000593748 216 ntBASIC3.52□□□□□ -1.85
CDH11P55287 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.52□□□□□ -1.85
CDH11P55287 AL031985.2-201ENST00000600955 480 ntBASIC3.52□□□□□ -1.85
CDH11P55287 AF131215.7-201ENST00000602443 707 ntBASIC3.52□□□□□ -1.85
CDH11P55287 AL590229.1-201ENST00000603497 542 ntBASIC3.52□□□□□ -1.85
CDH11P55287 AC092354.1-201ENST00000606057 376 ntBASIC3.52□□□□□ -1.85
CDH11P55287 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.52□□□□□ -1.85
CDH11P55287 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
CDH11P55287 AL356266.1-201ENST00000623311 483 ntBASIC3.52□□□□□ -1.85
CDH11P55287 AC073530.2-201ENST00000623987 261 ntBASIC3.52□□□□□ -1.85
CDH11P55287 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.52□□□□□ -1.85
CDH11P55287 FAM91A3P-201ENST00000456826 2544 ntBASIC3.52□□□□□ -1.85
CDH11P55287 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDH11P55287 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.52□□□□□ -1.85
CDH11P55287 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.52□□□□□ -1.85
CDH11P55287 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.52□□□□□ -1.85
CDH11P55287 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.52□□□□□ -1.85
CDH11P55287 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDH11P55287 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDH11P55287 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.52□□□□□ -1.85
CDH11P55287 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
CDH11P55287 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDH11P55287 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.52□□□□□ -1.85
CDH11P55287 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.52□□□□□ -1.85
CDH11P55287 AL353746.1-201ENST00000566293 6881 ntBASIC3.51□□□□□ -1.85
CDH11P55287 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDH11P55287 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CDH11P55287 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CDH11P55287 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH11P55287 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.51□□□□□ -1.85
CDH11P55287 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDH11P55287 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDH11P55287 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.51□□□□□ -1.85
CDH11P55287 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH11P55287 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CDH11P55287 RNU6-989P-201ENST00000362756 107 ntBASIC3.51□□□□□ -1.85
CDH11P55287 Y_RNA.77-201ENST00000362962 107 ntBASIC3.51□□□□□ -1.85
CDH11P55287 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH11P55287 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.51□□□□□ -1.85
CDH11P55287 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH11P55287 RPL32P23-201ENST00000397237 405 ntBASIC3.51□□□□□ -1.85
CDH11P55287 Z98941.1-201ENST00000407764 100 ntBASIC3.51□□□□□ -1.85
CDH11P55287 RNA5SP56-201ENST00000410277 118 ntBASIC3.51□□□□□ -1.85
CDH11P55287 CYCSP19-201ENST00000411715 316 ntBASIC3.51□□□□□ -1.85
CDH11P55287 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.51□□□□□ -1.85
CDH11P55287 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDH11P55287 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.51□□□□□ -1.85
CDH11P55287 AC127526.1-201ENST00000417526 366 ntBASIC3.51□□□□□ -1.85
CDH11P55287 RPL31P45-201ENST00000419532 356 ntBASIC3.51□□□□□ -1.85
CDH11P55287 RPS12P23-201ENST00000419579 400 ntBASIC3.51□□□□□ -1.85
CDH11P55287 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.51□□□□□ -1.85
CDH11P55287 GLRXP1-201ENST00000423261 334 ntBASIC3.51□□□□□ -1.85
CDH11P55287 AL445669.1-201ENST00000426743 755 ntBASIC3.51□□□□□ -1.85
CDH11P55287 PSMA6P3-201ENST00000428242 164 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms