Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AL049737.1-201ENST00000413920 1403 ntBASIC2.43□□□□□ -2.02
GTF2A1P52655 RNA5SP138-201ENST00000365098 114 ntBASIC2.43□□□□□ -2.02
GTF2A1P52655 AL121972.1-201ENST00000402023 252 ntBASIC2.43□□□□□ -2.02
GTF2A1P52655 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.43□□□□□ -2.02
GTF2A1P52655 ATP5F1P1-201ENST00000433775 569 ntBASIC2.43□□□□□ -2.02
GTF2A1P52655 AC112653.1-201ENST00000443851 386 ntBASIC2.43□□□□□ -2.02
GTF2A1P52655 TPTE2P6-202ENST00000445572 1007 ntBASIC2.43□□□□□ -2.02
GTF2A1P52655 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.43□□□□□ -2.02
GTF2A1P52655 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.43□□□□□ -2.02
GTF2A1P52655 GZMAP1-201ENST00000503054 631 ntBASIC2.43□□□□□ -2.02
GTF2A1P52655 AC004062.1-201ENST00000509926 645 ntBASIC2.43□□□□□ -2.02
GTF2A1P52655 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.43□□□□□ -2.02
GTF2A1P52655 SNORA74D-201ENST00000516404 141 ntBASIC2.43□□□□□ -2.02
GTF2A1P52655 SNORA31.20-201ENST00000517111 133 ntBASIC2.43□□□□□ -2.02
GTF2A1P52655 CKS1BP7-201ENST00000522230 235 ntBASIC2.43□□□□□ -2.02
GTF2A1P52655 PSMA2P1-201ENST00000526365 646 ntBASIC2.43□□□□□ -2.02
GTF2A1P52655 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.43□□□□□ -2.02
GTF2A1P52655 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
GTF2A1P52655 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
GTF2A1P52655 MTCO1P6-201ENST00000481192 1384 ntBASIC2.43□□□□□ -2.02
GTF2A1P52655 ZNF658B-202ENST00000615961 3375 ntBASIC2.43□□□□□ -2.02
GTF2A1P52655 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.43□□□□□ -2.02
GTF2A1P52655 AL645568.2-201ENST00000432815 1337 ntBASIC2.42□□□□□ -2.02
GTF2A1P52655 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
GTF2A1P52655 HSPE1P11-201ENST00000339579 310 ntBASIC2.42□□□□□ -2.02
GTF2A1P52655 OR56A5-201ENST00000340110 738 ntBASIC2.42□□□□□ -2.02
GTF2A1P52655 RNA5SP267-201ENST00000364893 126 ntBASIC2.42□□□□□ -2.02
GTF2A1P52655 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
GTF2A1P52655 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.42□□□□□ -2.02
GTF2A1P52655 AL356379.1-201ENST00000414105 126 ntBASIC2.42□□□□□ -2.02
GTF2A1P52655 SMC4P1-201ENST00000414479 527 ntBASIC2.42□□□□□ -2.02
GTF2A1P52655 MYL8P-204ENST00000431574 518 ntBASIC2.42□□□□□ -2.02
GTF2A1P52655 NDUFA5P10-201ENST00000432147 357 ntBASIC2.42□□□□□ -2.02
GTF2A1P52655 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.42□□□□□ -2.02
GTF2A1P52655 RPL31P53-201ENST00000457065 348 ntBASIC2.42□□□□□ -2.02
GTF2A1P52655 AC015908.1-201ENST00000478739 476 ntBASIC2.42□□□□□ -2.02
GTF2A1P52655 AC002456.2-201ENST00000509356 380 ntBASIC2.42□□□□□ -2.02
GTF2A1P52655 OR5AQ1P-201ENST00000527596 927 ntBASIC2.42□□□□□ -2.02
GTF2A1P52655 CCNG2P1-201ENST00000549521 1000 ntBASIC2.42□□□□□ -2.02
GTF2A1P52655 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.42□□□□□ -2.02
GTF2A1P52655 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.42□□□□□ -2.02
GTF2A1P52655 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.42□□□□□ -2.02
GTF2A1P52655 AC008277.2-201ENST00000605196 797 ntBASIC2.42□□□□□ -2.02
GTF2A1P52655 AC135178.6-201ENST00000605314 398 ntBASIC2.42□□□□□ -2.02
GTF2A1P52655 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.42□□□□□ -2.02
GTF2A1P52655 AC012640.5-201ENST00000623897 319 ntBASIC2.42□□□□□ -2.02
GTF2A1P52655 POMP-202ENST00000460403 1428 ntTSL 3 BASIC2.42□□□□□ -2.02
GTF2A1P52655 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.41□□□□□ -2.02
GTF2A1P52655 SNORA9-201ENST00000384215 133 ntBASIC2.41□□□□□ -2.02
GTF2A1P52655 RNA5SP252-201ENST00000391131 119 ntBASIC2.41□□□□□ -2.02
GTF2A1P52655 RN7SKP27-201ENST00000410684 333 ntBASIC2.41□□□□□ -2.02
GTF2A1P52655 RNU2-40P-201ENST00000410833 196 ntBASIC2.41□□□□□ -2.02
GTF2A1P52655 RPL21P32-201ENST00000419877 477 ntBASIC2.41□□□□□ -2.02
GTF2A1P52655 AC022018.1-201ENST00000430685 241 ntBASIC2.41□□□□□ -2.02
GTF2A1P52655 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.41□□□□□ -2.02
GTF2A1P52655 GPM6BP3-201ENST00000442797 145 ntBASIC2.41□□□□□ -2.02
GTF2A1P52655 HMGB1P26-201ENST00000452520 628 ntBASIC2.41□□□□□ -2.02
GTF2A1P52655 AC078857.1-201ENST00000469870 667 ntBASIC2.41□□□□□ -2.02
GTF2A1P52655 SETP11-201ENST00000473027 690 ntBASIC2.41□□□□□ -2.02
GTF2A1P52655 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.41□□□□□ -2.02
GTF2A1P52655 WBP1LP4-201ENST00000505043 344 ntBASIC2.41□□□□□ -2.02
GTF2A1P52655 ACTR6P1-201ENST00000514311 1104 ntBASIC2.41□□□□□ -2.02
GTF2A1P52655 AC034244.2-201ENST00000514668 858 ntBASIC2.41□□□□□ -2.02
GTF2A1P52655 RNU6-1004P-201ENST00000516584 111 ntBASIC2.41□□□□□ -2.02
GTF2A1P52655 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.41□□□□□ -2.02
GTF2A1P52655 DUXAP2-201ENST00000519198 589 ntBASIC2.41□□□□□ -2.02
GTF2A1P52655 OR4R2P-201ENST00000530815 597 ntBASIC2.41□□□□□ -2.02
GTF2A1P52655 AC093014.1-201ENST00000548926 724 ntBASIC2.41□□□□□ -2.02
GTF2A1P52655 MIR4635-201ENST00000583759 79 ntBASIC2.41□□□□□ -2.02
GTF2A1P52655 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
GTF2A1P52655 AC009902.3-201ENST00000606235 2172 ntBASIC2.41□□□□□ -2.02
GTF2A1P52655 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.41□□□□□ -2.02
GTF2A1P52655 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
GTF2A1P52655 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.41□□□□□ -2.02
GTF2A1P52655 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.4□□□□□ -2.03
GTF2A1P52655 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.4□□□□□ -2.03
GTF2A1P52655 Y_RNA.126-201ENST00000363382 111 ntBASIC2.4□□□□□ -2.03
GTF2A1P52655 RNU6-185P-201ENST00000384421 107 ntBASIC2.4□□□□□ -2.03
GTF2A1P52655 SNORA48.5-201ENST00000391143 135 ntBASIC2.4□□□□□ -2.03
GTF2A1P52655 MIR1250-201ENST00000408098 113 ntBASIC2.4□□□□□ -2.03
GTF2A1P52655 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC2.4□□□□□ -2.03
GTF2A1P52655 AC112220.1-201ENST00000434628 355 ntBASIC2.4□□□□□ -2.03
GTF2A1P52655 RPS20P5-201ENST00000434808 360 ntBASIC2.4□□□□□ -2.03
GTF2A1P52655 MTCYBP12-201ENST00000440559 1134 ntBASIC2.4□□□□□ -2.03
GTF2A1P52655 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC2.4□□□□□ -2.03
GTF2A1P52655 RPL30P14-201ENST00000482744 348 ntBASIC2.4□□□□□ -2.03
GTF2A1P52655 FAM172BP-201ENST00000487497 1089 ntBASIC2.4□□□□□ -2.03
GTF2A1P52655 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.4□□□□□ -2.03
GTF2A1P52655 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.4□□□□□ -2.03
GTF2A1P52655 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.4□□□□□ -2.03
GTF2A1P52655 MTCO3P44-201ENST00000510977 541 ntBASIC2.4□□□□□ -2.03
GTF2A1P52655 AC074029.1-201ENST00000552531 1044 ntBASIC2.4□□□□□ -2.03
GTF2A1P52655 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.4□□□□□ -2.03
GTF2A1P52655 AC025281.1-201ENST00000567026 265 ntBASIC2.4□□□□□ -2.03
GTF2A1P52655 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.4□□□□□ -2.03
GTF2A1P52655 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.4□□□□□ -2.03
GTF2A1P52655 AC124312.4-201ENST00000605533 310 ntBASIC2.4□□□□□ -2.03
GTF2A1P52655 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.4□□□□□ -2.03
GTF2A1P52655 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.4□□□□□ -2.03
GTF2A1P52655 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms