Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
LHX1P48742 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
LHX1P48742 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.66□□□□□ -1.82
LHX1P48742 XIAPP3-201ENST00000312918 795 ntBASIC3.66□□□□□ -1.82
LHX1P48742 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LHX1P48742 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LHX1P48742 SNORD113-6-201ENST00000363345 75 ntBASIC3.66□□□□□ -1.82
LHX1P48742 RNU6-1214P-201ENST00000363650 109 ntBASIC3.66□□□□□ -1.82
LHX1P48742 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.66□□□□□ -1.82
LHX1P48742 USP9YP33-201ENST00000412220 421 ntBASIC3.66□□□□□ -1.82
LHX1P48742 AC244098.2-201ENST00000422068 99 ntBASIC3.66□□□□□ -1.82
LHX1P48742 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.66□□□□□ -1.82
LHX1P48742 AC006946.1-201ENST00000429106 328 ntBASIC3.66□□□□□ -1.82
LHX1P48742 USP9YP35-201ENST00000435696 412 ntBASIC3.66□□□□□ -1.82
LHX1P48742 RPS29P31-201ENST00000446147 164 ntBASIC3.66□□□□□ -1.82
LHX1P48742 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LHX1P48742 MTND2P19-201ENST00000449129 1012 ntBASIC3.66□□□□□ -1.82
LHX1P48742 AC007967.1-201ENST00000455422 1159 ntBASIC3.66□□□□□ -1.82
LHX1P48742 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.66□□□□□ -1.82
LHX1P48742 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.66□□□□□ -1.82
LHX1P48742 AC097493.1-201ENST00000463958 372 ntBASIC3.66□□□□□ -1.82
LHX1P48742 AP000873.1-201ENST00000463987 400 ntBASIC3.66□□□□□ -1.82
LHX1P48742 RPL32P34-201ENST00000486380 400 ntBASIC3.66□□□□□ -1.82
LHX1P48742 AC090453.1-201ENST00000495560 436 ntBASIC3.66□□□□□ -1.82
LHX1P48742 AC074250.1-201ENST00000511117 192 ntBASIC3.66□□□□□ -1.82
LHX1P48742 AC006499.2-201ENST00000513470 337 ntBASIC3.66□□□□□ -1.82
LHX1P48742 SNORA70.19-201ENST00000516717 90 ntBASIC3.66□□□□□ -1.82
LHX1P48742 HSPA8P13-201ENST00000523715 472 ntBASIC3.66□□□□□ -1.82
LHX1P48742 DEFB131D-201ENST00000526803 184 ntBASIC3.66□□□□□ -1.82
LHX1P48742 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.66□□□□□ -1.82
LHX1P48742 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.66□□□□□ -1.82
LHX1P48742 LRRC34P1-201ENST00000542742 915 ntBASIC3.66□□□□□ -1.82
LHX1P48742 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.66□□□□□ -1.82
LHX1P48742 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.66□□□□□ -1.82
LHX1P48742 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.66□□□□□ -1.82
LHX1P48742 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.66□□□□□ -1.82
LHX1P48742 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.66□□□□□ -1.82
LHX1P48742 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.66□□□□□ -1.82
LHX1P48742 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.66□□□□□ -1.82
LHX1P48742 AL031281.1-201ENST00000604049 488 ntBASIC3.66□□□□□ -1.82
LHX1P48742 AC080013.4-201ENST00000607624 649 ntBASIC3.66□□□□□ -1.82
LHX1P48742 AC025588.4-201ENST00000615802 908 ntBASIC3.66□□□□□ -1.82
LHX1P48742 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.66□□□□□ -1.82
LHX1P48742 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.66□□□□□ -1.82
LHX1P48742 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LHX1P48742 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LHX1P48742 AL356274.2-201ENST00000624379 3752 ntBASIC3.65□□□□□ -1.82
LHX1P48742 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.65□□□□□ -1.82
LHX1P48742 EXOC5P1-201ENST00000510543 1969 ntBASIC3.65□□□□□ -1.82
LHX1P48742 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.65□□□□□ -1.82
LHX1P48742 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LHX1P48742 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LHX1P48742 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
LHX1P48742 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
LHX1P48742 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LHX1P48742 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
LHX1P48742 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LHX1P48742 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LHX1P48742 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LHX1P48742 MIR423-201ENST00000362201 94 ntBASIC3.65□□□□□ -1.83
LHX1P48742 HMGB1P17-201ENST00000403495 628 ntBASIC3.65□□□□□ -1.83
LHX1P48742 RNU2-15P-201ENST00000410692 191 ntBASIC3.65□□□□□ -1.83
LHX1P48742 OR1AA1P-201ENST00000419597 916 ntBASIC3.65□□□□□ -1.83
LHX1P48742 AL513174.1-201ENST00000423182 629 ntBASIC3.65□□□□□ -1.83
LHX1P48742 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.65□□□□□ -1.83
LHX1P48742 PSMA6P3-201ENST00000428242 164 ntBASIC3.65□□□□□ -1.83
LHX1P48742 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.65□□□□□ -1.83
LHX1P48742 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.65□□□□□ -1.83
LHX1P48742 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.65□□□□□ -1.83
LHX1P48742 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.65□□□□□ -1.83
LHX1P48742 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LHX1P48742 AC078817.1-201ENST00000492623 435 ntBASIC3.65□□□□□ -1.83
LHX1P48742 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.65□□□□□ -1.83
LHX1P48742 NIPA2P2-201ENST00000496376 1083 ntBASIC3.65□□□□□ -1.83
LHX1P48742 AC093663.1-201ENST00000497190 394 ntBASIC3.65□□□□□ -1.83
LHX1P48742 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LHX1P48742 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.65□□□□□ -1.83
LHX1P48742 AC118282.1-201ENST00000506408 765 ntBASIC3.65□□□□□ -1.83
LHX1P48742 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.65□□□□□ -1.83
LHX1P48742 AC093281.2-201ENST00000510153 597 ntBASIC3.65□□□□□ -1.83
LHX1P48742 FTH1P9-201ENST00000513251 355 ntBASIC3.65□□□□□ -1.83
LHX1P48742 SNORA70.14-201ENST00000516205 110 ntBASIC3.65□□□□□ -1.83
LHX1P48742 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.65□□□□□ -1.83
LHX1P48742 OR4P1P-201ENST00000530808 1136 ntBASIC3.65□□□□□ -1.83
LHX1P48742 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.65□□□□□ -1.83
LHX1P48742 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.65□□□□□ -1.83
LHX1P48742 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.65□□□□□ -1.83
LHX1P48742 AC112220.3-201ENST00000605502 502 ntBASIC3.65□□□□□ -1.83
LHX1P48742 AC022149.2-201ENST00000621061 203 ntBASIC3.65□□□□□ -1.83
LHX1P48742 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.65□□□□□ -1.83
LHX1P48742 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LHX1P48742 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.65□□□□□ -1.83
LHX1P48742 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.65□□□□□ -1.83
LHX1P48742 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.65□□□□□ -1.83
LHX1P48742 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LHX1P48742 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.65□□□□□ -1.83
LHX1P48742 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
LHX1P48742 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LHX1P48742 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
LHX1P48742 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms