Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.42□□□□□ -1.86
BRCC3P46736 AC090616.5-202ENST00000582111 297 ntBASIC3.42□□□□□ -1.86
BRCC3P46736 OR4G1P-201ENST00000588632 938 ntBASIC3.42□□□□□ -1.86
BRCC3P46736 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.42□□□□□ -1.86
BRCC3P46736 AC007687.1-201ENST00000602704 304 ntBASIC3.42□□□□□ -1.86
BRCC3P46736 AC099778.2-201ENST00000610904 211 ntBASIC3.42□□□□□ -1.86
BRCC3P46736 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.42□□□□□ -1.86
BRCC3P46736 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.42□□□□□ -1.86
BRCC3P46736 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.42□□□□□ -1.86
BRCC3P46736 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
BRCC3P46736 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.42□□□□□ -1.86
BRCC3P46736 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.42□□□□□ -1.86
BRCC3P46736 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
BRCC3P46736 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
BRCC3P46736 RPL23AP57-201ENST00000332361 466 ntBASIC3.41□□□□□ -1.86
BRCC3P46736 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
BRCC3P46736 MIR422A-201ENST00000362286 90 ntBASIC3.41□□□□□ -1.86
BRCC3P46736 RNU4-68P-201ENST00000364314 141 ntBASIC3.41□□□□□ -1.86
BRCC3P46736 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
BRCC3P46736 MIR513B-201ENST00000385136 84 ntBASIC3.41□□□□□ -1.86
BRCC3P46736 SNORD65.1-201ENST00000390889 71 ntBASIC3.41□□□□□ -1.86
BRCC3P46736 MTCYBP24-201ENST00000420387 1106 ntBASIC3.41□□□□□ -1.86
BRCC3P46736 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.41□□□□□ -1.86
BRCC3P46736 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.41□□□□□ -1.86
BRCC3P46736 GTF2IP7-202ENST00000436677 309 ntBASIC3.41□□□□□ -1.86
BRCC3P46736 AC241584.1-201ENST00000438469 1241 ntBASIC3.41□□□□□ -1.86
BRCC3P46736 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.41□□□□□ -1.86
BRCC3P46736 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.41□□□□□ -1.86
BRCC3P46736 AC004022.1-201ENST00000447766 1066 ntBASIC3.41□□□□□ -1.86
BRCC3P46736 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.41□□□□□ -1.86
BRCC3P46736 USP9YP25-201ENST00000457708 443 ntBASIC3.41□□□□□ -1.86
BRCC3P46736 S100A11P2-201ENST00000467589 312 ntBASIC3.41□□□□□ -1.86
BRCC3P46736 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
BRCC3P46736 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.41□□□□□ -1.86
BRCC3P46736 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.41□□□□□ -1.86
BRCC3P46736 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.41□□□□□ -1.86
BRCC3P46736 RN7SKP265-201ENST00000516448 223 ntBASIC3.41□□□□□ -1.86
BRCC3P46736 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.41□□□□□ -1.86
BRCC3P46736 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.41□□□□□ -1.86
BRCC3P46736 AC092470.1-201ENST00000546187 132 ntBASIC3.41□□□□□ -1.86
BRCC3P46736 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.41□□□□□ -1.86
BRCC3P46736 AL121603.1-201ENST00000553815 142 ntBASIC3.41□□□□□ -1.86
BRCC3P46736 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.41□□□□□ -1.86
BRCC3P46736 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.41□□□□□ -1.86
BRCC3P46736 MIR4425-201ENST00000580572 84 ntBASIC3.41□□□□□ -1.86
BRCC3P46736 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.41□□□□□ -1.86
BRCC3P46736 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.41□□□□□ -1.86
BRCC3P46736 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.41□□□□□ -1.86
BRCC3P46736 HSPE1P14-201ENST00000605812 302 ntBASIC3.41□□□□□ -1.86
BRCC3P46736 AC011816.2-201ENST00000607089 556 ntBASIC3.41□□□□□ -1.86
BRCC3P46736 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.41□□□□□ -1.86
BRCC3P46736 ATP5A1P2-202ENST00000616464 443 ntBASIC3.41□□□□□ -1.86
BRCC3P46736 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.41□□□□□ -1.86
BRCC3P46736 AC092628.2-201ENST00000622492 339 ntBASIC3.41□□□□□ -1.86
BRCC3P46736 AL157770.1-201ENST00000623049 439 ntBASIC3.41□□□□□ -1.86
BRCC3P46736 AL512506.2-201ENST00000624472 458 ntBASIC3.41□□□□□ -1.86
BRCC3P46736 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.41□□□□□ -1.86
BRCC3P46736 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
BRCC3P46736 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
BRCC3P46736 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.4□□□□□ -1.86
BRCC3P46736 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
BRCC3P46736 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.4□□□□□ -1.86
BRCC3P46736 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.4□□□□□ -1.87
BRCC3P46736 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.4□□□□□ -1.87
BRCC3P46736 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.4□□□□□ -1.87
BRCC3P46736 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.4□□□□□ -1.87
BRCC3P46736 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
BRCC3P46736 RPL31P54-201ENST00000429803 370 ntBASIC3.4□□□□□ -1.87
BRCC3P46736 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
BRCC3P46736 CST9LP2-201ENST00000437612 320 ntBASIC3.4□□□□□ -1.87
BRCC3P46736 EEF1A1P39-201ENST00000440791 250 ntBASIC3.4□□□□□ -1.87
BRCC3P46736 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.4□□□□□ -1.87
BRCC3P46736 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.4□□□□□ -1.87
BRCC3P46736 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
BRCC3P46736 RSL24D1P3-201ENST00000449255 495 ntBASIC3.4□□□□□ -1.87
BRCC3P46736 MRPS31P2-201ENST00000451581 518 ntBASIC3.4□□□□□ -1.87
BRCC3P46736 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.4□□□□□ -1.87
BRCC3P46736 AC010468.1-201ENST00000461022 817 ntBASIC3.4□□□□□ -1.87
BRCC3P46736 RPL23AP44-201ENST00000482216 473 ntBASIC3.4□□□□□ -1.87
BRCC3P46736 KLRA1P-201ENST00000503499 986 ntBASIC3.4□□□□□ -1.87
BRCC3P46736 AC008885.1-201ENST00000514930 301 ntBASIC3.4□□□□□ -1.87
BRCC3P46736 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.4□□□□□ -1.87
BRCC3P46736 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.4□□□□□ -1.87
BRCC3P46736 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.4□□□□□ -1.87
BRCC3P46736 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.4□□□□□ -1.87
BRCC3P46736 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.4□□□□□ -1.87
BRCC3P46736 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.4□□□□□ -1.87
BRCC3P46736 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.4□□□□□ -1.87
BRCC3P46736 PRELID3BP8-201ENST00000604148 295 ntBASIC3.4□□□□□ -1.87
BRCC3P46736 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.4□□□□□ -1.87
BRCC3P46736 AC092106.3-201ENST00000611308 722 ntBASIC3.4□□□□□ -1.87
BRCC3P46736 uc_338.25-201ENST00000613756 156 ntBASIC3.4□□□□□ -1.87
BRCC3P46736 AC079395.3-201ENST00000615161 484 ntBASIC3.4□□□□□ -1.87
BRCC3P46736 AC121761.2-201ENST00000617300 689 ntBASIC3.4□□□□□ -1.87
BRCC3P46736 AC068787.1-201ENST00000623908 691 ntBASIC3.4□□□□□ -1.87
BRCC3P46736 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.4□□□□□ -1.87
BRCC3P46736 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
BRCC3P46736 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
BRCC3P46736 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
BRCC3P46736 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms