Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RNU1-18P-201ENST00000363062 164 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 RNU6-289P-201ENST00000364093 107 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 RNU6-769P-201ENST00000384407 104 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
NKX2-1P43699 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
NKX2-1P43699 AL583835.1-201ENST00000399570 407 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 AL356421.1-201ENST00000403255 413 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 AL138878.1-201ENST00000405131 347 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 RPS16P5-201ENST00000406501 404 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 RNU2-37P-201ENST00000410695 177 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 RNU2-71P-201ENST00000411395 189 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 RPL17P12-201ENST00000413391 526 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 HMGB1P11-201ENST00000413899 637 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.32□□□□□ -1.88
NKX2-1P43699 HSFY4P-201ENST00000415994 1181 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 TMSB10P2-201ENST00000416049 131 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 CCDC58P2-201ENST00000417131 366 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 TOMM22P1-201ENST00000418578 312 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 Z97055.1-201ENST00000419730 712 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.32□□□□□ -1.88
NKX2-1P43699 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.32□□□□□ -1.88
NKX2-1P43699 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.32□□□□□ -1.88
NKX2-1P43699 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.32□□□□□ -1.88
NKX2-1P43699 AC011998.1-201ENST00000433403 117 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.32□□□□□ -1.88
NKX2-1P43699 RSU1P2-202ENST00000437884 485 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 RPL23AP52-201ENST00000439311 478 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.32□□□□□ -1.88
NKX2-1P43699 AC092641.1-201ENST00000440229 772 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.32□□□□□ -1.88
NKX2-1P43699 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.32□□□□□ -1.88
NKX2-1P43699 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.32□□□□□ -1.88
NKX2-1P43699 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.32□□□□□ -1.88
NKX2-1P43699 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.32□□□□□ -1.88
NKX2-1P43699 COX6CP12-201ENST00000446748 202 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 DNAJC19P1-201ENST00000455312 319 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 RPL9P32-201ENST00000464118 620 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 RN7SL354P-201ENST00000469282 294 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 AC017015.1-201ENST00000477387 286 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 AC110792.1-201ENST00000491826 472 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 RPL7P23-201ENST00000493874 747 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 RPL29P14-201ENST00000495837 428 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.32□□□□□ -1.88
NKX2-1P43699 AC096751.1-202ENST00000502691 1067 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.32□□□□□ -1.88
NKX2-1P43699 AC004069.2-201ENST00000505438 1114 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 AC010424.1-201ENST00000506336 297 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.32□□□□□ -1.88
NKX2-1P43699 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.32□□□□□ -1.88
NKX2-1P43699 AC034159.1-201ENST00000513885 583 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 RNU2-58P-201ENST00000516403 183 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 RNU6-1003P-201ENST00000517099 105 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 CR383656.6-201ENST00000550518 394 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.32□□□□□ -1.88
NKX2-1P43699 GTF2IP22-201ENST00000554443 182 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.32□□□□□ -1.88
NKX2-1P43699 AC012435.1-202ENST00000568772 240 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.32□□□□□ -1.88
NKX2-1P43699 MIR4644-201ENST00000579929 84 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.32□□□□□ -1.88
NKX2-1P43699 MIR4307-201ENST00000582802 84 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.32□□□□□ -1.88
NKX2-1P43699 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.32□□□□□ -1.88
NKX2-1P43699 AC022916.3-201ENST00000592961 742 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 AC012065.4-201ENST00000602445 679 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 TUG1_1.1-201ENST00000610654 145 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.32□□□□□ -1.88
NKX2-1P43699 AC244205.2-202ENST00000635781 342 ntBASIC3.32□□□□□ -1.88
NKX2-1P43699 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.32□□□□□ -1.88
NKX2-1P43699 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
NKX2-1P43699 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.32□□□□□ -1.88
NKX2-1P43699 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
NKX2-1P43699 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.31□□□□□ -1.88
NKX2-1P43699 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-1P43699 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-1P43699 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-1P43699 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-1P43699 AC079741.1-201ENST00000321498 212 ntBASIC3.31□□□□□ -1.88
NKX2-1P43699 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NKX2-1P43699 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-1P43699 FGF7P2-201ENST00000332473 296 ntBASIC3.31□□□□□ -1.88
NKX2-1P43699 RNU6-97P-201ENST00000363387 104 ntBASIC3.31□□□□□ -1.88
NKX2-1P43699 SNORD35B-201ENST00000363660 87 ntBASIC3.31□□□□□ -1.88
NKX2-1P43699 RNU6-777P-201ENST00000364265 104 ntBASIC3.31□□□□□ -1.88
NKX2-1P43699 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NKX2-1P43699 MIR1183-201ENST00000408856 89 ntBASIC3.31□□□□□ -1.88
NKX2-1P43699 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.31□□□□□ -1.88
NKX2-1P43699 RNA5SP36-201ENST00000410197 133 ntBASIC3.31□□□□□ -1.88
NKX2-1P43699 RNU2-47P-201ENST00000410649 186 ntBASIC3.31□□□□□ -1.88
NKX2-1P43699 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.31□□□□□ -1.88
NKX2-1P43699 AL590139.1-201ENST00000416267 400 ntBASIC3.31□□□□□ -1.88
NKX2-1P43699 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.31□□□□□ -1.88
NKX2-1P43699 RPL21P66-201ENST00000426566 466 ntBASIC3.31□□□□□ -1.88
NKX2-1P43699 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.31□□□□□ -1.88
NKX2-1P43699 VDAC1P3-201ENST00000434069 851 ntBASIC3.31□□□□□ -1.88
NKX2-1P43699 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.31□□□□□ -1.88
NKX2-1P43699 AL831737.1-201ENST00000441288 271 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms