Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.27□□□□□ -1.73
CIITAP33076 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.27□□□□□ -1.73
CIITAP33076 CDK8P2-201ENST00000415020 547 ntBASIC4.27□□□□□ -1.73
CIITAP33076 SDCBPP2-201ENST00000424643 885 ntBASIC4.27□□□□□ -1.73
CIITAP33076 USP9YP14-201ENST00000430663 563 ntBASIC4.27□□□□□ -1.73
CIITAP33076 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.27□□□□□ -1.73
CIITAP33076 ST13P20-201ENST00000447996 1065 ntBASIC4.27□□□□□ -1.73
CIITAP33076 AC006480.1-201ENST00000449887 378 ntBASIC4.27□□□□□ -1.73
CIITAP33076 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.27□□□□□ -1.73
CIITAP33076 AC098824.1-201ENST00000453565 980 ntBASIC4.27□□□□□ -1.73
CIITAP33076 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.27□□□□□ -1.73
CIITAP33076 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.27□□□□□ -1.73
CIITAP33076 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.27□□□□□ -1.73
CIITAP33076 AC005726.1-201ENST00000494679 427 ntBASIC4.27□□□□□ -1.73
CIITAP33076 UBE2CP3-201ENST00000502715 450 ntBASIC4.27□□□□□ -1.73
CIITAP33076 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.27□□□□□ -1.73
CIITAP33076 AC109458.1-201ENST00000508858 316 ntBASIC4.27□□□□□ -1.73
CIITAP33076 SAP18P1-201ENST00000512058 390 ntBASIC4.27□□□□□ -1.73
CIITAP33076 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.27□□□□□ -1.73
CIITAP33076 SUMO2P20-201ENST00000520803 283 ntBASIC4.27□□□□□ -1.73
CIITAP33076 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CIITAP33076 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.27□□□□□ -1.73
CIITAP33076 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.27□□□□□ -1.73
CIITAP33076 AP000873.5-201ENST00000533906 236 ntBASIC4.27□□□□□ -1.73
CIITAP33076 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.27□□□□□ -1.73
CIITAP33076 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.27□□□□□ -1.73
CIITAP33076 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.27□□□□□ -1.73
CIITAP33076 AC007424.1-203ENST00000554613 687 ntBASIC4.27□□□□□ -1.73
CIITAP33076 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.27□□□□□ -1.73
CIITAP33076 ZNF415P1-201ENST00000582279 1166 ntBASIC4.27□□□□□ -1.73
CIITAP33076 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.27□□□□□ -1.73
CIITAP33076 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.27□□□□□ -1.73
CIITAP33076 AC112230.1-201ENST00000604342 547 ntBASIC4.27□□□□□ -1.73
CIITAP33076 AC100793.4-201ENST00000613683 429 ntBASIC4.27□□□□□ -1.73
CIITAP33076 AC010678.1-201ENST00000614118 713 ntBASIC4.27□□□□□ -1.73
CIITAP33076 AL121772.2-201ENST00000614331 297 ntBASIC4.27□□□□□ -1.73
CIITAP33076 MIR4727-201ENST00000622232 55 ntBASIC4.27□□□□□ -1.73
CIITAP33076 AC039056.2-201ENST00000622261 511 ntBASIC4.27□□□□□ -1.73
CIITAP33076 AL161637.1-201ENST00000622380 412 ntBASIC4.27□□□□□ -1.73
CIITAP33076 MTND5P29-201ENST00000458676 1807 ntBASIC4.27□□□□□ -1.73
CIITAP33076 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CIITAP33076 AL356473.1-201ENST00000406203 1408 ntBASIC4.27□□□□□ -1.73
CIITAP33076 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CIITAP33076 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.27□□□□□ -1.73
CIITAP33076 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.27□□□□□ -1.73
CIITAP33076 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CIITAP33076 CR383658.2-201ENST00000547576 1525 ntBASIC4.26□□□□□ -1.73
CIITAP33076 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.26□□□□□ -1.73
CIITAP33076 PABPC1P9-201ENST00000426076 1612 ntBASIC4.26□□□□□ -1.73
CIITAP33076 Y_RNA.359-201ENST00000365498 102 ntBASIC4.26□□□□□ -1.73
CIITAP33076 RNU6-1119P-201ENST00000384349 108 ntBASIC4.26□□□□□ -1.73
CIITAP33076 RNU6-921P-201ENST00000384361 107 ntBASIC4.26□□□□□ -1.73
CIITAP33076 RN7SKP177-201ENST00000410567 355 ntBASIC4.26□□□□□ -1.73
CIITAP33076 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.26□□□□□ -1.73
CIITAP33076 RAC1P3-201ENST00000416129 580 ntBASIC4.26□□□□□ -1.73
CIITAP33076 AC092647.1-201ENST00000420654 287 ntBASIC4.26□□□□□ -1.73
CIITAP33076 AC093698.1-201ENST00000423843 571 ntBASIC4.26□□□□□ -1.73
CIITAP33076 AL512649.1-201ENST00000428997 581 ntBASIC4.26□□□□□ -1.73
CIITAP33076 UBE2FP3-201ENST00000436366 524 ntBASIC4.26□□□□□ -1.73
CIITAP33076 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.26□□□□□ -1.73
CIITAP33076 RPL23AP33-201ENST00000442301 452 ntBASIC4.26□□□□□ -1.73
CIITAP33076 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.26□□□□□ -1.73
CIITAP33076 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.26□□□□□ -1.73
CIITAP33076 COX6CP12-201ENST00000446748 202 ntBASIC4.26□□□□□ -1.73
CIITAP33076 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.26□□□□□ -1.73
CIITAP33076 SNRPGP9-201ENST00000456025 225 ntBASIC4.26□□□□□ -1.73
CIITAP33076 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.26□□□□□ -1.73
CIITAP33076 AC022034.3-201ENST00000471393 478 ntBASIC4.26□□□□□ -1.73
CIITAP33076 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.26□□□□□ -1.73
CIITAP33076 AL117351.2-201ENST00000513571 157 ntBASIC4.26□□□□□ -1.73
CIITAP33076 RNA5SP208-201ENST00000516156 78 ntBASIC4.26□□□□□ -1.73
CIITAP33076 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.26□□□□□ -1.73
CIITAP33076 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.26□□□□□ -1.73
CIITAP33076 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.26□□□□□ -1.73
CIITAP33076 SULT1C2P1-202ENST00000562418 459 ntBASIC4.26□□□□□ -1.73
CIITAP33076 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.26□□□□□ -1.73
CIITAP33076 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.26□□□□□ -1.73
CIITAP33076 AL009028.1-201ENST00000604895 802 ntBASIC4.26□□□□□ -1.73
CIITAP33076 AC107214.2-201ENST00000608204 634 ntBASIC4.26□□□□□ -1.73
CIITAP33076 AC005332.10-201ENST00000612725 619 ntBASIC4.26□□□□□ -1.73
CIITAP33076 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.26□□□□□ -1.73
CIITAP33076 U73479.1-201ENST00000618062 168 ntBASIC4.26□□□□□ -1.73
CIITAP33076 AC068722.2-201ENST00000618734 544 ntBASIC4.26□□□□□ -1.73
CIITAP33076 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.26□□□□□ -1.73
CIITAP33076 AC006065.5-201ENST00000623427 349 ntBASIC4.26□□□□□ -1.73
CIITAP33076 AL356596.1-201ENST00000624230 379 ntBASIC4.26□□□□□ -1.73
CIITAP33076 AC034229.5-201ENST00000624258 185 ntBASIC4.26□□□□□ -1.73
CIITAP33076 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.26□□□□□ -1.73
CIITAP33076 AL392088.2-201ENST00000637607 285 ntBASIC4.26□□□□□ -1.73
CIITAP33076 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
CIITAP33076 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CIITAP33076 AC117529.2-201ENST00000512159 2068 ntBASIC4.26□□□□□ -1.73
CIITAP33076 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
CIITAP33076 MTCO1P14-201ENST00000441695 1559 ntBASIC4.26□□□□□ -1.73
CIITAP33076 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CIITAP33076 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CIITAP33076 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.25□□□□□ -1.73
CIITAP33076 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CIITAP33076 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.25□□□□□ -1.73
CIITAP33076 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms