Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 SCARNA10-201ENST00000459255 330 ntBASIC4.36□□□□□ -1.71
NR4A1P22736 AP000893.1-201ENST00000474462 794 ntBASIC4.36□□□□□ -1.71
NR4A1P22736 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.36□□□□□ -1.71
NR4A1P22736 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.36□□□□□ -1.71
NR4A1P22736 RPL23AP41-201ENST00000484754 458 ntBASIC4.36□□□□□ -1.71
NR4A1P22736 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.36□□□□□ -1.71
NR4A1P22736 RPL38P4-201ENST00000502376 214 ntBASIC4.36□□□□□ -1.71
NR4A1P22736 NPM1P41-201ENST00000512920 831 ntBASIC4.36□□□□□ -1.71
NR4A1P22736 RNU6-277P-201ENST00000516272 106 ntBASIC4.36□□□□□ -1.71
NR4A1P22736 RNU7-30P-201ENST00000516835 62 ntBASIC4.36□□□□□ -1.71
NR4A1P22736 MYL12AP1-201ENST00000518490 515 ntBASIC4.36□□□□□ -1.71
NR4A1P22736 AP000676.2-201ENST00000529711 301 ntBASIC4.36□□□□□ -1.71
NR4A1P22736 AC087241.2-201ENST00000535801 324 ntBASIC4.36□□□□□ -1.71
NR4A1P22736 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NR4A1P22736 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.36□□□□□ -1.71
NR4A1P22736 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.36□□□□□ -1.71
NR4A1P22736 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.36□□□□□ -1.71
NR4A1P22736 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.36□□□□□ -1.71
NR4A1P22736 MIR4443-201ENST00000585052 53 ntBASIC4.36□□□□□ -1.71
NR4A1P22736 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.36□□□□□ -1.71
NR4A1P22736 BNIP3P22-201ENST00000593399 556 ntBASIC4.36□□□□□ -1.71
NR4A1P22736 AC133644.2-201ENST00000608142 540 ntBASIC4.36□□□□□ -1.71
NR4A1P22736 BX323046.1-201ENST00000610145 535 ntBASIC4.36□□□□□ -1.71
NR4A1P22736 AL365204.3-201ENST00000612448 685 ntBASIC4.36□□□□□ -1.71
NR4A1P22736 AL627230.1-201ENST00000613077 211 ntBASIC4.36□□□□□ -1.71
NR4A1P22736 AL591926.8-201ENST00000616876 211 ntBASIC4.36□□□□□ -1.71
NR4A1P22736 AC233309.1-201ENST00000619522 751 ntBASIC4.36□□□□□ -1.71
NR4A1P22736 AC074140.1-201ENST00000621617 208 ntBASIC4.36□□□□□ -1.71
NR4A1P22736 RMST_7.1-201ENST00000621935 268 ntBASIC4.36□□□□□ -1.71
NR4A1P22736 AC091905.4-201ENST00000623432 202 ntBASIC4.36□□□□□ -1.71
NR4A1P22736 AC067931.1-201ENST00000624190 671 ntBASIC4.36□□□□□ -1.71
NR4A1P22736 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.36□□□□□ -1.71
NR4A1P22736 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NR4A1P22736 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.36□□□□□ -1.71
NR4A1P22736 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.36□□□□□ -1.71
NR4A1P22736 AC105074.1-201ENST00000623380 3095 ntBASIC4.36□□□□□ -1.71
NR4A1P22736 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NR4A1P22736 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NR4A1P22736 MAPK10-304ENST00000641341 3984 ntBASIC4.36□□□□□ -1.71
NR4A1P22736 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.36□□□□□ -1.71
NR4A1P22736 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NR4A1P22736 AC114546.3-201ENST00000623582 1734 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.35□□□□□ -1.71
NR4A1P22736 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NR4A1P22736 RNA5SP428-201ENST00000365129 132 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NR4A1P22736 Y_RNA.419-201ENST00000384041 102 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NR4A1P22736 DSTNP4-201ENST00000399472 474 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 RAB28P1-201ENST00000411517 641 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 AL807761.1-201ENST00000417622 171 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 AC096632.1-201ENST00000427395 310 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 OR4F13P-201ENST00000428478 931 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.35□□□□□ -1.71
NR4A1P22736 YWHAZP8-201ENST00000436935 731 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.35□□□□□ -1.71
NR4A1P22736 AL049734.2-201ENST00000441066 616 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 AC079781.2-201ENST00000446424 169 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 IGHV5-78-201ENST00000450948 295 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.35□□□□□ -1.71
NR4A1P22736 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.35□□□□□ -1.71
NR4A1P22736 AC096576.1-201ENST00000489014 359 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 AC026427.2-201ENST00000506228 536 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 TMEM248P1-201ENST00000510579 951 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.35□□□□□ -1.71
NR4A1P22736 RNA5SP43-201ENST00000516559 110 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 AC090572.1-201ENST00000519251 160 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.35□□□□□ -1.71
NR4A1P22736 AC022616.3-201ENST00000523940 148 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.35□□□□□ -1.71
NR4A1P22736 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.35□□□□□ -1.71
NR4A1P22736 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.35□□□□□ -1.71
NR4A1P22736 OR4R1P-201ENST00000529879 463 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.35□□□□□ -1.71
NR4A1P22736 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.35□□□□□ -1.71
NR4A1P22736 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.35□□□□□ -1.71
NR4A1P22736 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.35□□□□□ -1.71
NR4A1P22736 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.35□□□□□ -1.71
NR4A1P22736 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.35□□□□□ -1.71
NR4A1P22736 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.35□□□□□ -1.71
NR4A1P22736 AL139395.1-201ENST00000603662 160 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 AC113139.1-201ENST00000605049 239 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 HSPE1P14-201ENST00000605812 302 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 AC105429.2-201ENST00000610567 517 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 AC131238.1-201ENST00000617135 328 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 AC009248.2-201ENST00000619826 254 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 AL356585.4-201ENST00000623078 1229 ntBASIC4.35□□□□□ -1.71
NR4A1P22736 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.35□□□□□ -1.71
NR4A1P22736 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.35□□□□□ -1.71
NR4A1P22736 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NR4A1P22736 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
NR4A1P22736 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.35□□□□□ -1.71
NR4A1P22736 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NR4A1P22736 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.35□□□□□ -1.71
NR4A1P22736 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
NR4A1P22736 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
NR4A1P22736 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
NR4A1P22736 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms