Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.79□□□□□ -1.64
ATF4P18848 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.79□□□□□ -1.64
ATF4P18848 AC008814.1-201ENST00000603797 406 ntBASIC4.79□□□□□ -1.64
ATF4P18848 RNU4-89P-201ENST00000607443 133 ntBASIC4.79□□□□□ -1.64
ATF4P18848 SNORD91B-202ENST00000608459 222 ntBASIC4.79□□□□□ -1.64
ATF4P18848 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.79□□□□□ -1.64
ATF4P18848 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.79□□□□□ -1.64
ATF4P18848 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.79□□□□□ -1.64
ATF4P18848 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.79□□□□□ -1.64
ATF4P18848 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.79□□□□□ -1.64
ATF4P18848 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.79□□□□□ -1.64
ATF4P18848 AP001541.1-201ENST00000623322 1904 ntBASIC4.79□□□□□ -1.64
ATF4P18848 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
ATF4P18848 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATF4P18848 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.79□□□□□ -1.64
ATF4P18848 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATF4P18848 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.79□□□□□ -1.64
ATF4P18848 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATF4P18848 PABPC1P6-201ENST00000445594 1829 ntBASIC4.79□□□□□ -1.64
ATF4P18848 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.79□□□□□ -1.64
ATF4P18848 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.78□□□□□ -1.64
ATF4P18848 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATF4P18848 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.78□□□□□ -1.64
ATF4P18848 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATF4P18848 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.78□□□□□ -1.64
ATF4P18848 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
ATF4P18848 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ATF4P18848 A2MP1-204ENST00000566278 4130 ntBASIC4.78□□□□□ -1.64
ATF4P18848 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATF4P18848 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATF4P18848 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATF4P18848 RNU6-600P-201ENST00000362524 99 ntBASIC4.78□□□□□ -1.64
ATF4P18848 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATF4P18848 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ATF4P18848 SNORA16.2-201ENST00000390991 127 ntBASIC4.78□□□□□ -1.64
ATF4P18848 PPIAP9-201ENST00000403866 498 ntBASIC4.78□□□□□ -1.64
ATF4P18848 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.78□□□□□ -1.64
ATF4P18848 NDUFB4P7-201ENST00000423198 363 ntBASIC4.78□□□□□ -1.64
ATF4P18848 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.78□□□□□ -1.64
ATF4P18848 AL451062.2-201ENST00000427515 271 ntBASIC4.78□□□□□ -1.64
ATF4P18848 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.78□□□□□ -1.64
ATF4P18848 AL451139.1-201ENST00000434718 346 ntBASIC4.78□□□□□ -1.64
ATF4P18848 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.78□□□□□ -1.64
ATF4P18848 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
ATF4P18848 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC4.78□□□□□ -1.64
ATF4P18848 DYNLL1P5-201ENST00000467158 270 ntBASIC4.78□□□□□ -1.64
ATF4P18848 RPS20P22-201ENST00000473700 357 ntBASIC4.78□□□□□ -1.64
ATF4P18848 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.78□□□□□ -1.64
ATF4P18848 AC083982.1-201ENST00000485679 344 ntBASIC4.78□□□□□ -1.64
ATF4P18848 HMGN1P13-201ENST00000505795 138 ntBASIC4.78□□□□□ -1.64
ATF4P18848 RNU2-69P-201ENST00000516061 100 ntBASIC4.78□□□□□ -1.64
ATF4P18848 RNU6-1256P-201ENST00000516539 103 ntBASIC4.78□□□□□ -1.64
ATF4P18848 RNA5SP360-201ENST00000516555 118 ntBASIC4.78□□□□□ -1.64
ATF4P18848 RNA5SP291-201ENST00000517222 105 ntBASIC4.78□□□□□ -1.64
ATF4P18848 AP001804.3-201ENST00000525146 880 ntBASIC4.78□□□□□ -1.64
ATF4P18848 AP000889.2-201ENST00000532684 490 ntBASIC4.78□□□□□ -1.64
ATF4P18848 AC093027.1-201ENST00000546698 429 ntBASIC4.78□□□□□ -1.64
ATF4P18848 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.78□□□□□ -1.64
ATF4P18848 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.78□□□□□ -1.64
ATF4P18848 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.78□□□□□ -1.64
ATF4P18848 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.78□□□□□ -1.64
ATF4P18848 AC006270.2-201ENST00000578523 652 ntBASIC4.78□□□□□ -1.64
ATF4P18848 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC4.78□□□□□ -1.64
ATF4P18848 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.78□□□□□ -1.64
ATF4P18848 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.78□□□□□ -1.64
ATF4P18848 AC006026.1-201ENST00000444025 1803 ntBASIC4.78□□□□□ -1.64
ATF4P18848 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATF4P18848 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.78□□□□□ -1.64
ATF4P18848 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC4.78□□□□□ -1.64
ATF4P18848 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATF4P18848 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.78□□□□□ -1.64
ATF4P18848 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATF4P18848 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
ATF4P18848 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ATF4P18848 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ATF4P18848 HSPA8P4-201ENST00000511877 1920 ntBASIC4.78□□□□□ -1.64
ATF4P18848 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
ATF4P18848 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC4.77□□□□□ -1.65
ATF4P18848 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
ATF4P18848 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.77□□□□□ -1.65
ATF4P18848 AL672167.1-204ENST00000641875 3017 ntBASIC4.77□□□□□ -1.65
ATF4P18848 SNORA31-201ENST00000362607 130 ntBASIC4.77□□□□□ -1.65
ATF4P18848 RNU6-1167P-201ENST00000363227 94 ntBASIC4.77□□□□□ -1.65
ATF4P18848 Y_RNA.167-201ENST00000363735 109 ntBASIC4.77□□□□□ -1.65
ATF4P18848 Y_RNA.301-201ENST00000364990 103 ntBASIC4.77□□□□□ -1.65
ATF4P18848 RNA5SP485-201ENST00000365053 119 ntBASIC4.77□□□□□ -1.65
ATF4P18848 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ATF4P18848 Y_RNA.431-201ENST00000384086 102 ntBASIC4.77□□□□□ -1.65
ATF4P18848 MIR301A-201ENST00000385261 86 ntBASIC4.77□□□□□ -1.65
ATF4P18848 RN7SKP177-201ENST00000410567 355 ntBASIC4.77□□□□□ -1.65
ATF4P18848 RNU2-71P-201ENST00000411395 189 ntBASIC4.77□□□□□ -1.65
ATF4P18848 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.77□□□□□ -1.65
ATF4P18848 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.77□□□□□ -1.65
ATF4P18848 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.77□□□□□ -1.65
ATF4P18848 VDAC1P3-201ENST00000434069 851 ntBASIC4.77□□□□□ -1.65
ATF4P18848 AC236972.2-201ENST00000434979 310 ntBASIC4.77□□□□□ -1.65
ATF4P18848 HMGB3P11-201ENST00000440127 604 ntBASIC4.77□□□□□ -1.65
ATF4P18848 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.77□□□□□ -1.65
ATF4P18848 EEF1B2P3-201ENST00000447718 678 ntBASIC4.77□□□□□ -1.65
ATF4P18848 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms