Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DOAP06340 OR4A15-201ENST00000314706 1035 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HLA-DOAP06340 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DOAP06340 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DOAP06340 RNU6-984P-201ENST00000363236 109 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 RNU6-444P-201ENST00000383988 108 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 RNU6-533P-201ENST00000384144 107 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 Y_RNA.453-201ENST00000384223 109 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 MIR30B-201ENST00000384850 88 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 FCF1P10-201ENST00000407590 479 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 SNORA57.3-201ENST00000411095 141 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 RPS3AP3-201ENST00000411933 242 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DOAP06340 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DOAP06340 RPL7AP73-201ENST00000413490 353 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 AC138393.2-201ENST00000414742 246 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 AC016831.2-201ENST00000417179 352 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 C1DP2-201ENST00000418167 426 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DOAP06340 AL445669.1-201ENST00000426743 755 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 ELOCP14-201ENST00000428070 331 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 RPL36P19-201ENST00000430744 301 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DOAP06340 ELOCP7-201ENST00000439968 331 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DOAP06340 RPL39P6-201ENST00000448289 150 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 AL354710.1-201ENST00000453641 246 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 AMD1P1-201ENST00000457220 922 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DOAP06340 RPL21P11-201ENST00000461458 483 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 AC097493.1-201ENST00000463958 372 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 RN7SL585P-201ENST00000470538 280 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DOAP06340 AC006517.1-201ENST00000480485 328 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 RPL7P24-201ENST00000493052 752 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DOAP06340 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DOAP06340 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DOAP06340 AC108078.1-201ENST00000508073 725 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DOAP06340 PTGES3P3-201ENST00000511479 482 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 AC021146.3-201ENST00000511911 260 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 AC006499.2-201ENST00000513470 337 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 AC010342.1-201ENST00000514047 877 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DOAP06340 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DOAP06340 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HLA-DOAP06340 AP001646.1-201ENST00000527936 915 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.7□□□□□ -1.66
HLA-DOAP06340 SULT1C2P2-201ENST00000562517 294 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DOAP06340 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.7□□□□□ -1.66
HLA-DOAP06340 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DOAP06340 AC005730.3-201ENST00000583067 366 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DOAP06340 AC112191.3-201ENST00000604371 277 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 AC104662.1-201ENST00000604448 511 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DOAP06340 FP236240.3-201ENST00000623061 327 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DOAP06340 MARK2P15-201ENST00000432204 2186 ntBASIC4.7□□□□□ -1.66
HLA-DOAP06340 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DOAP06340 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DOAP06340 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DOAP06340 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DOAP06340 MTND4P29-201ENST00000503122 1372 ntBASIC4.69□□□□□ -1.66
HLA-DOAP06340 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
HLA-DOAP06340 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HLA-DOAP06340 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DOAP06340 AL161912.2-201ENST00000565707 3007 ntBASIC4.69□□□□□ -1.66
HLA-DOAP06340 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DOAP06340 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DOAP06340 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DOAP06340 RNU6-289P-201ENST00000364093 107 ntBASIC4.69□□□□□ -1.66
HLA-DOAP06340 MIR506-201ENST00000384998 124 ntBASIC4.69□□□□□ -1.66
HLA-DOAP06340 RN7SKP156-201ENST00000410308 342 ntBASIC4.69□□□□□ -1.66
HLA-DOAP06340 AC073264.1-201ENST00000411508 416 ntBASIC4.69□□□□□ -1.66
HLA-DOAP06340 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DOAP06340 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DOAP06340 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DOAP06340 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DOAP06340 FTLP19-201ENST00000433300 394 ntBASIC4.69□□□□□ -1.66
HLA-DOAP06340 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DOAP06340 RPL7P36-201ENST00000444633 681 ntBASIC4.69□□□□□ -1.66
HLA-DOAP06340 DPPA3P1-201ENST00000448050 469 ntBASIC4.69□□□□□ -1.66
HLA-DOAP06340 AL133547.1-201ENST00000448546 220 ntBASIC4.69□□□□□ -1.66
HLA-DOAP06340 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.69□□□□□ -1.66
HLA-DOAP06340 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DOAP06340 GAPDHP17-201ENST00000449858 1001 ntBASIC4.69□□□□□ -1.66
HLA-DOAP06340 PSPHP1-201ENST00000450062 261 ntBASIC4.69□□□□□ -1.66
HLA-DOAP06340 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.69□□□□□ -1.66
HLA-DOAP06340 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.69□□□□□ -1.66
HLA-DOAP06340 snoU109.1-201ENST00000459339 135 ntBASIC4.69□□□□□ -1.66
HLA-DOAP06340 RPS26P28-201ENST00000470806 348 ntBASIC4.69□□□□□ -1.66
HLA-DOAP06340 ACTR3P3-201ENST00000480448 893 ntBASIC4.69□□□□□ -1.66
HLA-DOAP06340 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.69□□□□□ -1.66
HLA-DOAP06340 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DOAP06340 AC008628.2-201ENST00000502605 298 ntBASIC4.69□□□□□ -1.66
HLA-DOAP06340 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms