Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MTCYBP28-201ENST00000566728 1132 ntBASIC2.82□□□□□ -1.96
APOEP02649 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.82□□□□□ -1.96
APOEP02649 AC002076.2-201ENST00000617362 122 ntBASIC2.82□□□□□ -1.96
APOEP02649 CR381653.2-201ENST00000624041 768 ntBASIC2.82□□□□□ -1.96
APOEP02649 SCARNA15.3-201ENST00000626315 122 ntBASIC2.82□□□□□ -1.96
APOEP02649 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.82□□□□□ -1.96
APOEP02649 SCARNA4.1-201ENST00000628597 123 ntBASIC2.82□□□□□ -1.96
APOEP02649 AC119674.1-220ENST00000641502 1048 ntBASIC2.82□□□□□ -1.96
APOEP02649 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
APOEP02649 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
APOEP02649 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
APOEP02649 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
APOEP02649 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.82□□□□□ -1.96
APOEP02649 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.81□□□□□ -1.96
APOEP02649 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.81□□□□□ -1.96
APOEP02649 RNU6-859P-201ENST00000362728 107 ntBASIC2.81□□□□□ -1.96
APOEP02649 RNU6-819P-201ENST00000364116 107 ntBASIC2.81□□□□□ -1.96
APOEP02649 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
APOEP02649 LINC01347-201ENST00000417964 355 ntBASIC2.81□□□□□ -1.96
APOEP02649 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.81□□□□□ -1.96
APOEP02649 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.81□□□□□ -1.96
APOEP02649 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.81□□□□□ -1.96
APOEP02649 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.81□□□□□ -1.96
APOEP02649 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.81□□□□□ -1.96
APOEP02649 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.81□□□□□ -1.96
APOEP02649 SNORD109B-201ENST00000458961 67 ntBASIC2.81□□□□□ -1.96
APOEP02649 SNORD109A-201ENST00000459128 67 ntBASIC2.81□□□□□ -1.96
APOEP02649 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.81□□□□□ -1.96
APOEP02649 SEM1P1-201ENST00000506694 209 ntBASIC2.81□□□□□ -1.96
APOEP02649 AC019227.1-201ENST00000526902 510 ntBASIC2.81□□□□□ -1.96
APOEP02649 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.81□□□□□ -1.96
APOEP02649 SERPINE4P-201ENST00000554978 281 ntBASIC2.81□□□□□ -1.96
APOEP02649 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.81□□□□□ -1.96
APOEP02649 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.81□□□□□ -1.96
APOEP02649 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.81□□□□□ -1.96
APOEP02649 OR2AS2P-201ENST00000606902 342 ntBASIC2.81□□□□□ -1.96
APOEP02649 SNHG22-203ENST00000617833 660 ntBASIC2.81□□□□□ -1.96
APOEP02649 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.81□□□□□ -1.96
APOEP02649 MTND5P28-201ENST00000438005 1594 ntBASIC2.81□□□□□ -1.96
APOEP02649 AC233263.6-201ENST00000631132 1963 ntBASIC2.81□□□□□ -1.96
APOEP02649 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.81□□□□□ -1.96
APOEP02649 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.81□□□□□ -1.96
APOEP02649 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.8□□□□□ -1.96
APOEP02649 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
APOEP02649 TAB3P1-202ENST00000452645 1634 ntBASIC2.8□□□□□ -1.96
APOEP02649 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
APOEP02649 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
APOEP02649 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
APOEP02649 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
APOEP02649 DSTNP4-201ENST00000399472 474 ntBASIC2.8□□□□□ -1.96
APOEP02649 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
APOEP02649 RNA5SP184-201ENST00000411071 108 ntBASIC2.8□□□□□ -1.96
APOEP02649 UBE2D3P2-201ENST00000424409 445 ntBASIC2.8□□□□□ -1.96
APOEP02649 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.8□□□□□ -1.96
APOEP02649 AC019097.1-201ENST00000424783 735 ntBASIC2.8□□□□□ -1.96
APOEP02649 AC063976.3-201ENST00000426849 329 ntBASIC2.8□□□□□ -1.96
APOEP02649 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.8□□□□□ -1.96
APOEP02649 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.8□□□□□ -1.96
APOEP02649 MRPL50P4-201ENST00000446432 475 ntBASIC2.8□□□□□ -1.96
APOEP02649 MRPL35P4-201ENST00000453682 566 ntBASIC2.8□□□□□ -1.96
APOEP02649 AC004924.1-201ENST00000480160 781 ntBASIC2.8□□□□□ -1.96
APOEP02649 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.8□□□□□ -1.96
APOEP02649 AC004062.1-201ENST00000509926 645 ntBASIC2.8□□□□□ -1.96
APOEP02649 AC034159.1-201ENST00000513885 583 ntBASIC2.8□□□□□ -1.96
APOEP02649 AC025881.1-201ENST00000518851 512 ntBASIC2.8□□□□□ -1.96
APOEP02649 ELOCP31-201ENST00000540463 467 ntBASIC2.8□□□□□ -1.96
APOEP02649 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.8□□□□□ -1.96
APOEP02649 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.8□□□□□ -1.96
APOEP02649 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.8□□□□□ -1.96
APOEP02649 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC2.8□□□□□ -1.96
APOEP02649 MIR4319-201ENST00000577285 85 ntBASIC2.8□□□□□ -1.96
APOEP02649 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.8□□□□□ -1.96
APOEP02649 AL035413.2-201ENST00000604801 525 ntBASIC2.8□□□□□ -1.96
APOEP02649 AC019159.1-201ENST00000605094 187 ntBASIC2.8□□□□□ -1.96
APOEP02649 AC008962.1-201ENST00000605729 304 ntBASIC2.8□□□□□ -1.96
APOEP02649 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.8□□□□□ -1.96
APOEP02649 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.8□□□□□ -1.96
APOEP02649 AL121594.5-201ENST00000631724 573 ntBASIC2.8□□□□□ -1.96
APOEP02649 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
APOEP02649 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
APOEP02649 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
APOEP02649 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.79□□□□□ -1.96
APOEP02649 FO393413.1-201ENST00000402892 195 ntBASIC2.79□□□□□ -1.96
APOEP02649 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.79□□□□□ -1.96
APOEP02649 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.79□□□□□ -1.96
APOEP02649 AL121578.1-201ENST00000428051 892 ntBASIC2.79□□□□□ -1.96
APOEP02649 AC112220.1-201ENST00000434628 355 ntBASIC2.79□□□□□ -1.96
APOEP02649 RPL36AP6-201ENST00000435770 321 ntBASIC2.79□□□□□ -1.96
APOEP02649 AC098799.1-201ENST00000504752 800 ntBASIC2.79□□□□□ -1.96
APOEP02649 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.79□□□□□ -1.96
APOEP02649 SNORA31.13-201ENST00000516624 135 ntBASIC2.79□□□□□ -1.96
APOEP02649 EIF5A2P1-201ENST00000564027 460 ntBASIC2.79□□□□□ -1.96
APOEP02649 AC012182.1-201ENST00000570133 895 ntBASIC2.79□□□□□ -1.96
APOEP02649 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
APOEP02649 RPL12P50-201ENST00000603116 116 ntBASIC2.79□□□□□ -1.96
APOEP02649 HSPE1P14-201ENST00000605812 302 ntBASIC2.79□□□□□ -1.96
APOEP02649 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.79□□□□□ -1.96
APOEP02649 AC007998.5-201ENST00000622938 237 ntBASIC2.79□□□□□ -1.96
APOEP02649 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.79□□□□□ -1.96
APOEP02649 U6.107-201ENST00000637108 79 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms