Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.64□□□□□ -1.67
CNOT4O95628 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.64□□□□□ -1.67
CNOT4O95628 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.64□□□□□ -1.67
CNOT4O95628 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.64□□□□□ -1.67
CNOT4O95628 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CNOT4O95628 AC092447.10-201ENST00000620607 1652 ntBASIC4.64□□□□□ -1.67
CNOT4O95628 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CNOT4O95628 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CNOT4O95628 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
CNOT4O95628 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.63□□□□□ -1.67
CNOT4O95628 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CNOT4O95628 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CNOT4O95628 AC114947.2-201ENST00000565748 2125 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 AC008758.3-201ENST00000507003 1829 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CNOT4O95628 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CNOT4O95628 AL161781.1-201ENST00000354277 403 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 U3.3-201ENST00000362986 216 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 Y_RNA.128-201ENST00000363391 112 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 Y_RNA.216-201ENST00000364205 93 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 SNORA4.3-201ENST00000365564 137 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 Y_RNA.422-201ENST00000384054 114 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CNOT4O95628 AC016769.3-201ENST00000396562 315 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CNOT4O95628 AL024474.1-201ENST00000404655 591 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 DUTP5-201ENST00000406790 469 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 MIR1182-201ENST00000408363 97 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 U3.36-201ENST00000408418 213 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 RPS15AP12-201ENST00000419498 388 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 AL732292.1-201ENST00000426692 226 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.63□□□□□ -1.67
CNOT4O95628 GPM6BP2-201ENST00000432046 144 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 RPS6P12-201ENST00000432491 726 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 HSPE1P28-201ENST00000443139 211 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 GPM6BP1-201ENST00000446387 144 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 AL356010.1-201ENST00000456364 102 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 RNU6-329P-201ENST00000459618 107 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.63□□□□□ -1.67
CNOT4O95628 AC078785.3-201ENST00000476607 425 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 AC007686.1-201ENST00000488511 463 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.63□□□□□ -1.67
CNOT4O95628 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.63□□□□□ -1.67
CNOT4O95628 RNA5SP497-201ENST00000516081 97 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 Vault.1-201ENST00000516474 102 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 RNU6-410P-201ENST00000517006 107 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 RNA5SP230-201ENST00000517039 122 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.63□□□□□ -1.67
CNOT4O95628 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.63□□□□□ -1.67
CNOT4O95628 MIR4480-201ENST00000582492 71 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 AC098848.2-201ENST00000588023 330 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 AC108738.1-201ENST00000603703 237 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 AL355472.4-201ENST00000610233 626 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 AC099494.2-201ENST00000623371 978 ntBASIC4.63□□□□□ -1.67
CNOT4O95628 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.63□□□□□ -1.67
CNOT4O95628 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.63□□□□□ -1.67
CNOT4O95628 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.63□□□□□ -1.67
CNOT4O95628 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CNOT4O95628 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CNOT4O95628 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.63□□□□□ -1.67
CNOT4O95628 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CNOT4O95628 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CNOT4O95628 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.63□□□□□ -1.67
CNOT4O95628 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CNOT4O95628 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CNOT4O95628 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CNOT4O95628 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CNOT4O95628 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.63□□□□□ -1.67
CNOT4O95628 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CNOT4O95628 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CNOT4O95628 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CNOT4O95628 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.62□□□□□ -1.67
CNOT4O95628 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
CNOT4O95628 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CNOT4O95628 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CNOT4O95628 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CNOT4O95628 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CNOT4O95628 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CNOT4O95628 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.62□□□□□ -1.67
CNOT4O95628 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
CNOT4O95628 SALL4P2-201ENST00000423288 2910 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CNOT4O95628 RNY4P16-201ENST00000364768 94 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 RNA5SP167-201ENST00000365461 116 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 SNORD82-201ENST00000365530 70 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CNOT4O95628 RNU6-1160P-201ENST00000384546 104 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 MIR600-201ENST00000385007 98 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.62□□□□□ -1.67
CNOT4O95628 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.62□□□□□ -1.67
CNOT4O95628 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.62□□□□□ -1.67
CNOT4O95628 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 NDUFB4P5-201ENST00000415445 361 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 AC127526.1-201ENST00000417526 366 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 AL645937.1-202ENST00000421799 937 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 DDX39BP1-205ENST00000422507 192 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 RPS12P5-201ENST00000423449 371 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 DUTP6-201ENST00000425573 462 ntBASIC4.62□□□□□ -1.67
CNOT4O95628 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms