Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.6□□□□□ -1.83
PCF11O94913 AC019131.2-201ENST00000609071 870 ntBASIC3.6□□□□□ -1.83
PCF11O94913 AC107294.3-201ENST00000609211 526 ntBASIC3.6□□□□□ -1.83
PCF11O94913 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PCF11O94913 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.6□□□□□ -1.83
PCF11O94913 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PCF11O94913 PTP4A1P7-201ENST00000423476 514 ntBASIC3.59□□□□□ -1.83
PCF11O94913 Z98742.2-201ENST00000431564 187 ntBASIC3.59□□□□□ -1.83
PCF11O94913 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.59□□□□□ -1.83
PCF11O94913 GAPDHP27-201ENST00000447427 1020 ntBASIC3.59□□□□□ -1.83
PCF11O94913 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.59□□□□□ -1.83
PCF11O94913 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC3.59□□□□□ -1.83
PCF11O94913 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.59□□□□□ -1.83
PCF11O94913 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.59□□□□□ -1.83
PCF11O94913 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC3.59□□□□□ -1.83
PCF11O94913 AC034236.3-201ENST00000605999 461 ntBASIC3.59□□□□□ -1.83
PCF11O94913 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC3.59□□□□□ -1.83
PCF11O94913 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
PCF11O94913 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PCF11O94913 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PCF11O94913 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.59□□□□□ -1.83
PCF11O94913 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PCF11O94913 ZNF355P-201ENST00000427301 3216 ntBASIC3.59□□□□□ -1.84
PCF11O94913 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.59□□□□□ -1.84
PCF11O94913 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
PCF11O94913 MIR142-201ENST00000384835 87 ntBASIC3.59□□□□□ -1.84
PCF11O94913 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PCF11O94913 SPA17P1-201ENST00000416656 452 ntBASIC3.59□□□□□ -1.84
PCF11O94913 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.59□□□□□ -1.84
PCF11O94913 RPS15AP28-201ENST00000435088 386 ntBASIC3.59□□□□□ -1.84
PCF11O94913 MUPP-201ENST00000438111 566 ntBASIC3.59□□□□□ -1.84
PCF11O94913 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.59□□□□□ -1.84
PCF11O94913 AP000893.1-201ENST00000474462 794 ntBASIC3.59□□□□□ -1.84
PCF11O94913 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.59□□□□□ -1.84
PCF11O94913 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.59□□□□□ -1.84
PCF11O94913 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.59□□□□□ -1.84
PCF11O94913 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.59□□□□□ -1.84
PCF11O94913 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.59□□□□□ -1.84
PCF11O94913 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.59□□□□□ -1.84
PCF11O94913 AC128687.1-201ENST00000605304 619 ntBASIC3.59□□□□□ -1.84
PCF11O94913 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.59□□□□□ -1.84
PCF11O94913 AC084035.1-201ENST00000634543 607 ntBASIC3.59□□□□□ -1.84
PCF11O94913 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.59□□□□□ -1.84
PCF11O94913 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.58□□□□□ -1.84
PCF11O94913 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
PCF11O94913 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
PCF11O94913 NDUFB4P5-201ENST00000415445 361 ntBASIC3.58□□□□□ -1.84
PCF11O94913 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.58□□□□□ -1.84
PCF11O94913 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.58□□□□□ -1.84
PCF11O94913 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.58□□□□□ -1.84
PCF11O94913 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC3.58□□□□□ -1.84
PCF11O94913 AC106872.3-201ENST00000495104 446 ntBASIC3.58□□□□□ -1.84
PCF11O94913 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCF11O94913 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.58□□□□□ -1.84
PCF11O94913 CR589904.2-201ENST00000612533 440 ntBASIC3.58□□□□□ -1.84
PCF11O94913 AC145207.9-201ENST00000623802 325 ntBASIC3.58□□□□□ -1.84
PCF11O94913 AC066616.2-201ENST00000559334 1481 ntBASIC3.58□□□□□ -1.84
PCF11O94913 GABPAP-201ENST00000419271 1356 ntBASIC3.57□□□□□ -1.84
PCF11O94913 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCF11O94913 AC025125.1-201ENST00000624743 1922 ntBASIC3.57□□□□□ -1.84
PCF11O94913 MTATP6P11-201ENST00000428071 670 ntBASIC3.57□□□□□ -1.84
PCF11O94913 RPS24P8-201ENST00000431490 402 ntBASIC3.57□□□□□ -1.84
PCF11O94913 RNU6-347P-201ENST00000516658 105 ntBASIC3.57□□□□□ -1.84
PCF11O94913 AC126177.3-201ENST00000551839 688 ntBASIC3.57□□□□□ -1.84
PCF11O94913 AC234775.3-201ENST00000564612 656 ntBASIC3.57□□□□□ -1.84
PCF11O94913 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.57□□□□□ -1.84
PCF11O94913 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.57□□□□□ -1.84
PCF11O94913 AL022099.1-201ENST00000604551 712 ntBASIC3.57□□□□□ -1.84
PCF11O94913 AL118496.1-201ENST00000440201 1812 ntBASIC3.57□□□□□ -1.84
PCF11O94913 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.57□□□□□ -1.84
PCF11O94913 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCF11O94913 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCF11O94913 AL139811.1-201ENST00000424779 2299 ntBASIC3.57□□□□□ -1.84
PCF11O94913 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.56□□□□□ -1.84
PCF11O94913 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PCF11O94913 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
PCF11O94913 SNORA25.6-201ENST00000364121 118 ntBASIC3.56□□□□□ -1.84
PCF11O94913 RNU1-91P-201ENST00000364746 163 ntBASIC3.56□□□□□ -1.84
PCF11O94913 RNA5SP88-201ENST00000365560 109 ntBASIC3.56□□□□□ -1.84
PCF11O94913 RPL21P75-201ENST00000396599 483 ntBASIC3.56□□□□□ -1.84
PCF11O94913 RPL21P1-201ENST00000399532 476 ntBASIC3.56□□□□□ -1.84
PCF11O94913 RPL21P28-201ENST00000401418 483 ntBASIC3.56□□□□□ -1.84
PCF11O94913 AL592114.1-201ENST00000403842 483 ntBASIC3.56□□□□□ -1.84
PCF11O94913 AL138785.1-201ENST00000425821 331 ntBASIC3.56□□□□□ -1.84
PCF11O94913 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.56□□□□□ -1.84
PCF11O94913 MTCO3P11-201ENST00000455103 774 ntBASIC3.56□□□□□ -1.84
PCF11O94913 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.56□□□□□ -1.84
PCF11O94913 RPL21P16-201ENST00000495531 483 ntBASIC3.56□□□□□ -1.84
PCF11O94913 FAM92A1P2-202ENST00000504766 877 ntBASIC3.56□□□□□ -1.84
PCF11O94913 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.56□□□□□ -1.84
PCF11O94913 AC083899.3-201ENST00000603413 594 ntBASIC3.56□□□□□ -1.84
PCF11O94913 AL161912.3-201ENST00000605404 628 ntBASIC3.56□□□□□ -1.84
PCF11O94913 AC007620.3-201ENST00000608131 497 ntBASIC3.56□□□□□ -1.84
PCF11O94913 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.56□□□□□ -1.84
PCF11O94913 AP003072.5-201ENST00000623872 773 ntBASIC3.56□□□□□ -1.84
PCF11O94913 MTCO1P14-201ENST00000441695 1559 ntBASIC3.56□□□□□ -1.84
PCF11O94913 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.56□□□□□ -1.84
PCF11O94913 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PCF11O94913 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PCF11O94913 AL023284.1-201ENST00000403956 276 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms