Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 snoU13.24-201ENST00000458998 104 ntBASIC1.85□□□□□ -2.11
SSSCA1O60232 RPL7P49-201ENST00000471402 708 ntBASIC1.85□□□□□ -2.11
SSSCA1O60232 AC008565.1-201ENST00000509046 885 ntBASIC1.85□□□□□ -2.11
SSSCA1O60232 AC006445.2-201ENST00000510061 472 ntBASIC1.85□□□□□ -2.11
SSSCA1O60232 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.85□□□□□ -2.11
SSSCA1O60232 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.85□□□□□ -2.11
SSSCA1O60232 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.85□□□□□ -2.11
SSSCA1O60232 AC104115.2-201ENST00000523026 687 ntBASIC1.85□□□□□ -2.11
SSSCA1O60232 AHI1-217ENST00000534469 680 ntTSL 3 BASIC1.85□□□□□ -2.11
SSSCA1O60232 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.85□□□□□ -2.11
SSSCA1O60232 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.85□□□□□ -2.11
SSSCA1O60232 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC1.85□□□□□ -2.11
SSSCA1O60232 MTND4LP24-201ENST00000572277 291 ntBASIC1.85□□□□□ -2.11
SSSCA1O60232 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC1.85□□□□□ -2.11
SSSCA1O60232 VIS1.1-201ENST00000610517 203 ntBASIC1.85□□□□□ -2.11
SSSCA1O60232 AC034102.8-201ENST00000615146 484 ntBASIC1.85□□□□□ -2.11
SSSCA1O60232 MIR6864-201ENST00000617935 70 ntBASIC1.85□□□□□ -2.11
SSSCA1O60232 MIR6766-201ENST00000622641 72 ntBASIC1.85□□□□□ -2.11
SSSCA1O60232 FAM157B-203ENST00000639350 358 ntBASIC1.85□□□□□ -2.11
SSSCA1O60232 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC1.85□□□□□ -2.11
SSSCA1O60232 AL122126.1-201ENST00000546905 1318 ntBASIC1.85□□□□□ -2.11
SSSCA1O60232 AC104446.1-201ENST00000613728 1321 ntBASIC1.85□□□□□ -2.11
SSSCA1O60232 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SSSCA1O60232 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SSSCA1O60232 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SSSCA1O60232 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SSSCA1O60232 RNA5SP37-201ENST00000365420 130 ntBASIC1.84□□□□□ -2.11
SSSCA1O60232 RNU6-317P-201ENST00000384031 107 ntBASIC1.84□□□□□ -2.11
SSSCA1O60232 MIR518C-201ENST00000384822 101 ntBASIC1.84□□□□□ -2.11
SSSCA1O60232 MIR34A-201ENST00000385130 110 ntBASIC1.84□□□□□ -2.11
SSSCA1O60232 MIR670-201ENST00000390142 98 ntBASIC1.84□□□□□ -2.11
SSSCA1O60232 RNU2-21P-201ENST00000410368 188 ntBASIC1.84□□□□□ -2.11
SSSCA1O60232 RNU2-52P-201ENST00000410680 190 ntBASIC1.84□□□□□ -2.11
SSSCA1O60232 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
SSSCA1O60232 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC1.84□□□□□ -2.11
SSSCA1O60232 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.84□□□□□ -2.11
SSSCA1O60232 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.84□□□□□ -2.11
SSSCA1O60232 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.84□□□□□ -2.11
SSSCA1O60232 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.84□□□□□ -2.11
SSSCA1O60232 AC004263.1-201ENST00000479327 332 ntBASIC1.84□□□□□ -2.11
SSSCA1O60232 AC090096.1-201ENST00000489168 390 ntBASIC1.84□□□□□ -2.11
SSSCA1O60232 AC090255.1-201ENST00000495779 349 ntBASIC1.84□□□□□ -2.11
SSSCA1O60232 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.84□□□□□ -2.11
SSSCA1O60232 IGLV3-17-201ENST00000519099 244 ntBASIC1.84□□□□□ -2.11
SSSCA1O60232 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.84□□□□□ -2.11
SSSCA1O60232 MTND2P26-201ENST00000528255 1029 ntBASIC1.84□□□□□ -2.11
SSSCA1O60232 AC021269.2-201ENST00000532318 330 ntBASIC1.84□□□□□ -2.11
SSSCA1O60232 CR383656.14-201ENST00000551951 406 ntBASIC1.84□□□□□ -2.11
SSSCA1O60232 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC1.84□□□□□ -2.11
SSSCA1O60232 ATP1B3P1-201ENST00000605365 821 ntBASIC1.84□□□□□ -2.11
SSSCA1O60232 AC020923.1-201ENST00000624021 917 ntBASIC1.84□□□□□ -2.11
SSSCA1O60232 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
SSSCA1O60232 AL137790.1-201ENST00000634283 177 ntBASIC1.84□□□□□ -2.11
SSSCA1O60232 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.84□□□□□ -2.11
SSSCA1O60232 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
SSSCA1O60232 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.83□□□□□ -2.12
SSSCA1O60232 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SSSCA1O60232 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
SSSCA1O60232 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.83□□□□□ -2.12
SSSCA1O60232 MTND4P1-201ENST00000457501 1466 ntBASIC1.83□□□□□ -2.12
SSSCA1O60232 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SSSCA1O60232 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.83□□□□□ -2.12
SSSCA1O60232 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.83□□□□□ -2.12
SSSCA1O60232 RNA5SP139-201ENST00000364340 117 ntBASIC1.83□□□□□ -2.12
SSSCA1O60232 RNU6-301P-201ENST00000384277 107 ntBASIC1.83□□□□□ -2.12
SSSCA1O60232 NUP35P2-201ENST00000416748 943 ntBASIC1.83□□□□□ -2.12
SSSCA1O60232 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.83□□□□□ -2.12
SSSCA1O60232 RPL31P20-201ENST00000449593 360 ntBASIC1.83□□□□□ -2.12
SSSCA1O60232 RNU6-717P-201ENST00000459076 104 ntBASIC1.83□□□□□ -2.12
SSSCA1O60232 AC010285.1-201ENST00000470580 392 ntBASIC1.83□□□□□ -2.12
SSSCA1O60232 RBM43P1-201ENST00000476891 1081 ntBASIC1.83□□□□□ -2.12
SSSCA1O60232 RPL23AP70-201ENST00000483361 460 ntBASIC1.83□□□□□ -2.12
SSSCA1O60232 AC109486.1-201ENST00000486833 374 ntBASIC1.83□□□□□ -2.12
SSSCA1O60232 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.83□□□□□ -2.12
SSSCA1O60232 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SSSCA1O60232 ACTR6P1-201ENST00000514311 1104 ntBASIC1.83□□□□□ -2.12
SSSCA1O60232 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC1.83□□□□□ -2.12
SSSCA1O60232 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.83□□□□□ -2.12
SSSCA1O60232 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SSSCA1O60232 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.83□□□□□ -2.12
SSSCA1O60232 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.83□□□□□ -2.12
SSSCA1O60232 VN1R90P-201ENST00000595717 726 ntBASIC1.83□□□□□ -2.12
SSSCA1O60232 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.83□□□□□ -2.12
SSSCA1O60232 U73023.1-201ENST00000603134 700 ntBASIC1.83□□□□□ -2.12
SSSCA1O60232 AC013562.2-201ENST00000611632 603 ntBASIC1.83□□□□□ -2.12
SSSCA1O60232 OR8B1P-202ENST00000641132 1178 ntBASIC1.83□□□□□ -2.12
SSSCA1O60232 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
SSSCA1O60232 AC016717.2-201ENST00000609089 5141 ntBASIC1.83□□□□□ -2.12
SSSCA1O60232 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
SSSCA1O60232 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
SSSCA1O60232 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SSSCA1O60232 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.82□□□□□ -2.12
SSSCA1O60232 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
SSSCA1O60232 AL512646.1-201ENST00000269395 1077 ntBASIC1.82□□□□□ -2.12
SSSCA1O60232 RNA5SP252-201ENST00000391131 119 ntBASIC1.82□□□□□ -2.12
SSSCA1O60232 RN7SKP140-201ENST00000411196 284 ntBASIC1.82□□□□□ -2.12
SSSCA1O60232 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.82□□□□□ -2.12
SSSCA1O60232 AC244033.1-201ENST00000426826 870 ntBASIC1.82□□□□□ -2.12
SSSCA1O60232 AC000041.1-201ENST00000439655 175 ntBASIC1.82□□□□□ -2.12
SSSCA1O60232 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms