Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
SSNA1O43805 CDC42P4-201ENST00000510507 563 ntBASIC2.35□□□□□ -2.03
SSNA1O43805 AC010625.1-201ENST00000511296 403 ntBASIC2.35□□□□□ -2.03
SSNA1O43805 RNU6-1095P-201ENST00000516148 108 ntBASIC2.35□□□□□ -2.03
SSNA1O43805 RPPH1-2P-201ENST00000516688 293 ntBASIC2.35□□□□□ -2.03
SSNA1O43805 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.35□□□□□ -2.03
SSNA1O43805 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC2.35□□□□□ -2.03
SSNA1O43805 AP003102.1-201ENST00000525638 661 ntBASIC2.35□□□□□ -2.03
SSNA1O43805 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.35□□□□□ -2.03
SSNA1O43805 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.35□□□□□ -2.03
SSNA1O43805 GTF2IP22-201ENST00000554443 182 ntBASIC2.35□□□□□ -2.03
SSNA1O43805 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.35□□□□□ -2.03
SSNA1O43805 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.35□□□□□ -2.03
SSNA1O43805 ADAM3B-201ENST00000569937 840 ntBASIC2.35□□□□□ -2.03
SSNA1O43805 MIR3609-201ENST00000582661 80 ntBASIC2.35□□□□□ -2.03
SSNA1O43805 SNORD39.3-201ENST00000584451 71 ntBASIC2.35□□□□□ -2.03
SSNA1O43805 AL020997.3-201ENST00000602843 359 ntBASIC2.35□□□□□ -2.03
SSNA1O43805 RPL12P50-201ENST00000603116 116 ntBASIC2.35□□□□□ -2.03
SSNA1O43805 AC008745.1-201ENST00000604064 271 ntBASIC2.35□□□□□ -2.03
SSNA1O43805 AC104237.2-201ENST00000612456 443 ntBASIC2.35□□□□□ -2.03
SSNA1O43805 MIR6862-1-201ENST00000613016 70 ntBASIC2.35□□□□□ -2.03
SSNA1O43805 MIR6862-2-201ENST00000614755 70 ntBASIC2.35□□□□□ -2.03
SSNA1O43805 AC027309.3-201ENST00000623419 351 ntBASIC2.35□□□□□ -2.03
SSNA1O43805 AC103798.2-201ENST00000624292 632 ntBASIC2.35□□□□□ -2.03
SSNA1O43805 AC068880.5-201ENST00000624331 290 ntBASIC2.35□□□□□ -2.03
SSNA1O43805 FO624990.1-201ENST00000636373 85 ntBASIC2.35□□□□□ -2.03
SSNA1O43805 NUP58P1-201ENST00000502546 1738 ntBASIC2.34□□□□□ -2.03
SSNA1O43805 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.34□□□□□ -2.03
SSNA1O43805 SNORD51.1-201ENST00000365405 77 ntBASIC2.34□□□□□ -2.03
SSNA1O43805 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.34□□□□□ -2.03
SSNA1O43805 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SSNA1O43805 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.34□□□□□ -2.03
SSNA1O43805 RN7SKP159-201ENST00000410657 292 ntBASIC2.34□□□□□ -2.03
SSNA1O43805 RNU2-25P-201ENST00000411041 191 ntBASIC2.34□□□□□ -2.03
SSNA1O43805 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.34□□□□□ -2.03
SSNA1O43805 AC092427.1-202ENST00000430569 476 ntBASIC2.34□□□□□ -2.03
SSNA1O43805 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.34□□□□□ -2.03
SSNA1O43805 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.34□□□□□ -2.03
SSNA1O43805 AL513043.1-201ENST00000439124 535 ntBASIC2.34□□□□□ -2.03
SSNA1O43805 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.34□□□□□ -2.03
SSNA1O43805 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.34□□□□□ -2.03
SSNA1O43805 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.34□□□□□ -2.03
SSNA1O43805 PNPLA4P1-201ENST00000458328 305 ntBASIC2.34□□□□□ -2.03
SSNA1O43805 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.34□□□□□ -2.03
SSNA1O43805 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.34□□□□□ -2.03
SSNA1O43805 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.34□□□□□ -2.03
SSNA1O43805 RNU6-551P-201ENST00000516661 103 ntBASIC2.34□□□□□ -2.03
SSNA1O43805 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.34□□□□□ -2.03
SSNA1O43805 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.34□□□□□ -2.03
SSNA1O43805 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SSNA1O43805 CASP1P1-201ENST00000526345 212 ntBASIC2.34□□□□□ -2.03
SSNA1O43805 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.34□□□□□ -2.03
SSNA1O43805 MIR3922-201ENST00000585192 84 ntBASIC2.34□□□□□ -2.03
SSNA1O43805 AC013244.1-201ENST00000604279 193 ntBASIC2.34□□□□□ -2.03
SSNA1O43805 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.34□□□□□ -2.03
SSNA1O43805 AC012443.1-201ENST00000605605 231 ntBASIC2.34□□□□□ -2.03
SSNA1O43805 AC024560.3-201ENST00000608482 349 ntBASIC2.34□□□□□ -2.03
SSNA1O43805 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.34□□□□□ -2.03
SSNA1O43805 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SSNA1O43805 AC009093.8-201ENST00000641769 292 ntBASIC2.34□□□□□ -2.03
SSNA1O43805 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SSNA1O43805 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.34□□□□□ -2.04
SSNA1O43805 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.34□□□□□ -2.04
SSNA1O43805 ZNF519P1-201ENST00000449011 1626 ntBASIC2.34□□□□□ -2.04
SSNA1O43805 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SSNA1O43805 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SSNA1O43805 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
SSNA1O43805 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.33□□□□□ -2.04
SSNA1O43805 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.33□□□□□ -2.04
SSNA1O43805 ARF4P3-201ENST00000397387 509 ntBASIC2.33□□□□□ -2.04
SSNA1O43805 AL023807.1-201ENST00000407932 359 ntBASIC2.33□□□□□ -2.04
SSNA1O43805 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SSNA1O43805 AL009174.1-201ENST00000426577 416 ntBASIC2.33□□□□□ -2.04
SSNA1O43805 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.33□□□□□ -2.04
SSNA1O43805 TRBV26-201ENST00000456572 344 ntBASIC2.33□□□□□ -2.04
SSNA1O43805 CABYRP1-201ENST00000465493 1045 ntBASIC2.33□□□□□ -2.04
SSNA1O43805 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SSNA1O43805 AC117440.1-201ENST00000474107 571 ntBASIC2.33□□□□□ -2.04
SSNA1O43805 RPS3AP43-201ENST00000479743 781 ntBASIC2.33□□□□□ -2.04
SSNA1O43805 RPS27P27-201ENST00000498779 255 ntBASIC2.33□□□□□ -2.04
SSNA1O43805 RNU6-416P-201ENST00000516265 103 ntBASIC2.33□□□□□ -2.04
SSNA1O43805 RNA5SP367-201ENST00000516557 118 ntBASIC2.33□□□□□ -2.04
SSNA1O43805 PAICSP4-201ENST00000517543 1253 ntBASIC2.33□□□□□ -2.04
SSNA1O43805 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.33□□□□□ -2.04
SSNA1O43805 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.33□□□□□ -2.04
SSNA1O43805 AC010546.1-201ENST00000569391 485 ntBASIC2.33□□□□□ -2.04
SSNA1O43805 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SSNA1O43805 DUXAP3-201ENST00000603616 594 ntBASIC2.33□□□□□ -2.04
SSNA1O43805 AL022099.1-201ENST00000604551 712 ntBASIC2.33□□□□□ -2.04
SSNA1O43805 AC096586.1-201ENST00000610267 561 ntBASIC2.33□□□□□ -2.04
SSNA1O43805 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC2.33□□□□□ -2.04
SSNA1O43805 MIR6830-201ENST00000636015 70 ntBASIC2.33□□□□□ -2.04
SSNA1O43805 AC087359.1-201ENST00000508335 1740 ntBASIC2.33□□□□□ -2.04
SSNA1O43805 MTCO1P6-201ENST00000481192 1384 ntBASIC2.33□□□□□ -2.04
SSNA1O43805 MTND5P11-201ENST00000511037 1812 ntBASIC2.33□□□□□ -2.04
SSNA1O43805 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SSNA1O43805 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.32□□□□□ -2.04
SSNA1O43805 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SSNA1O43805 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SSNA1O43805 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms