Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AL357075.1-201ENST00000404107 726 ntBASIC2.87□□□□□ -1.95
TRAF3IP2O43734 AP000567.1-201ENST00000406413 156 ntBASIC2.87□□□□□ -1.95
TRAF3IP2O43734 AL356320.2-201ENST00000417263 507 ntBASIC2.87□□□□□ -1.95
TRAF3IP2O43734 AC092634.6-201ENST00000418558 192 ntBASIC2.87□□□□□ -1.95
TRAF3IP2O43734 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.87□□□□□ -1.95
TRAF3IP2O43734 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 BX890604.2-201ENST00000427883 474 ntBASIC2.87□□□□□ -1.95
TRAF3IP2O43734 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 AC005300.1-201ENST00000428401 373 ntBASIC2.87□□□□□ -1.95
TRAF3IP2O43734 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 NANOGP2-201ENST00000435391 727 ntBASIC2.87□□□□□ -1.95
TRAF3IP2O43734 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 COX6CP18-201ENST00000448769 222 ntBASIC2.87□□□□□ -1.95
TRAF3IP2O43734 BX276092.4-201ENST00000452056 248 ntBASIC2.87□□□□□ -1.95
TRAF3IP2O43734 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.87□□□□□ -1.95
TRAF3IP2O43734 PTGES3P5-201ENST00000455109 434 ntBASIC2.87□□□□□ -1.95
TRAF3IP2O43734 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 SNORD11.1-201ENST00000459482 85 ntBASIC2.87□□□□□ -1.95
TRAF3IP2O43734 AC146507.1-201ENST00000468335 354 ntBASIC2.87□□□□□ -1.95
TRAF3IP2O43734 RN7SL442P-201ENST00000473804 320 ntBASIC2.87□□□□□ -1.95
TRAF3IP2O43734 RPL21P103-201ENST00000479921 488 ntBASIC2.87□□□□□ -1.95
TRAF3IP2O43734 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 RN7SKP277-201ENST00000516895 283 ntBASIC2.87□□□□□ -1.95
TRAF3IP2O43734 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 MTND3P13-201ENST00000574391 343 ntBASIC2.87□□□□□ -1.95
TRAF3IP2O43734 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 LLPHP1-201ENST00000603571 367 ntBASIC2.87□□□□□ -1.95
TRAF3IP2O43734 RNA5SP108-201ENST00000605921 117 ntBASIC2.87□□□□□ -1.95
TRAF3IP2O43734 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 AC068722.2-201ENST00000618734 544 ntBASIC2.87□□□□□ -1.95
TRAF3IP2O43734 AC048347.1-201ENST00000624621 427 ntBASIC2.87□□□□□ -1.95
TRAF3IP2O43734 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 AC090897.3-201ENST00000636973 1157 ntBASIC2.87□□□□□ -1.95
TRAF3IP2O43734 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 AL672296.1-201ENST00000427780 2158 ntBASIC2.87□□□□□ -1.95
TRAF3IP2O43734 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
TRAF3IP2O43734 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TRAF3IP2O43734 RPL7P26-201ENST00000333817 754 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
TRAF3IP2O43734 RNU6-413P-201ENST00000384115 107 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 RNU6-906P-201ENST00000384700 70 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 SSXP10-201ENST00000402595 565 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.86□□□□□ -1.95
TRAF3IP2O43734 BOLA3P4-201ENST00000418151 400 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.86□□□□□ -1.95
TRAF3IP2O43734 GTF2IP23-201ENST00000423746 351 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 RPL7P44-201ENST00000424827 742 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 AC005326.1-201ENST00000429197 123 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 AC005345.1-201ENST00000431868 217 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 NEK4P1-201ENST00000433383 879 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.86□□□□□ -1.95
TRAF3IP2O43734 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.86□□□□□ -1.95
TRAF3IP2O43734 AC084290.1-201ENST00000434995 374 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.86□□□□□ -1.95
TRAF3IP2O43734 Z75741.1-201ENST00000446793 314 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 AC007327.1-201ENST00000447461 264 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 RPL29P29-201ENST00000448725 423 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 AC125238.1-201ENST00000448842 249 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.86□□□□□ -1.95
TRAF3IP2O43734 RPL5P24-201ENST00000463742 885 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 RN7SL807P-201ENST00000470923 297 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.86□□□□□ -1.95
TRAF3IP2O43734 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.86□□□□□ -1.95
TRAF3IP2O43734 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.86□□□□□ -1.95
TRAF3IP2O43734 AC110794.1-201ENST00000505816 425 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 AC114322.1-201ENST00000506771 926 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 AC010265.1-201ENST00000513509 211 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 SNORA64.4-201ENST00000516632 81 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 AC087808.1-201ENST00000520501 361 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TRAF3IP2O43734 AP001189.2-201ENST00000527320 189 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.86□□□□□ -1.95
TRAF3IP2O43734 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.86□□□□□ -1.95
TRAF3IP2O43734 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.86□□□□□ -1.95
TRAF3IP2O43734 SULT1C2P1-202ENST00000562418 459 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.86□□□□□ -1.95
TRAF3IP2O43734 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.86□□□□□ -1.95
TRAF3IP2O43734 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.86□□□□□ -1.95
TRAF3IP2O43734 AC007566.2-201ENST00000603642 413 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.86□□□□□ -1.95
TRAF3IP2O43734 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.86□□□□□ -1.95
TRAF3IP2O43734 uc_338.25-201ENST00000613756 156 ntBASIC2.86□□□□□ -1.95
TRAF3IP2O43734 AL078595.3-201ENST00000623815 1166 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms