Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC091805.2-201ENST00000603848 235 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM38O00635 AL365503.1-201ENST00000605247 905 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 NDUFA8P1-201ENST00000605525 367 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 AC092354.1-201ENST00000606057 376 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM38O00635 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM38O00635 AC012150.2-201ENST00000621300 544 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 AC040168.1-201ENST00000623594 991 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 MIR3653-201ENST00000625572 110 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 RNA5SP196-201ENST00000625967 102 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
TRIM38O00635 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM38O00635 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
TRIM38O00635 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
TRIM38O00635 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
TRIM38O00635 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM38O00635 AC092447.10-201ENST00000620607 1652 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM38O00635 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM38O00635 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
TRIM38O00635 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM38O00635 CR383658.2-201ENST00000547576 1525 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 OR5P1P-201ENST00000299512 925 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 Y_RNA.61-201ENST00000362835 102 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 RNU1-132P-201ENST00000364300 164 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 RNU6-343P-201ENST00000364709 104 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TRIM38O00635 RPS26P8-201ENST00000393490 348 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 AC025750.1-201ENST00000399891 379 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 BTF3P7-201ENST00000407097 488 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 RN7SKP33-201ENST00000410942 340 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 HMGB1P11-201ENST00000413899 637 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM38O00635 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM38O00635 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM38O00635 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM38O00635 LARP1BP3-201ENST00000437229 869 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 AL831737.1-201ENST00000441288 271 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 NDUFS5P3-201ENST00000450668 321 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 KATNBL1P6-201ENST00000453433 915 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 AC091564.1-201ENST00000464563 479 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 AC053481.1-201ENST00000467217 306 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 AC025445.1-201ENST00000502728 300 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM38O00635 AC006499.5-201ENST00000505037 514 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM38O00635 AC117522.1-201ENST00000509821 380 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 PARP4P3-201ENST00000510265 317 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM38O00635 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM38O00635 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM38O00635 AC074344.1-201ENST00000512823 224 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM38O00635 AC025881.1-201ENST00000518851 512 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM38O00635 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM38O00635 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM38O00635 AC024224.1-201ENST00000538284 609 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 GLYCAM1-201ENST00000546596 285 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.38□□□□□ -1.71
TRIM38O00635 AC012435.1-202ENST00000568772 240 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 C8orf59P2-201ENST00000603441 271 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 AC010201.1-201ENST00000605051 540 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM38O00635 AL356321.1-201ENST00000621360 228 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 AC091925.2-201ENST00000625059 256 ntBASIC4.38□□□□□ -1.71
TRIM38O00635 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TRIM38O00635 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM38O00635 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
TRIM38O00635 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM38O00635 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM38O00635 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM38O00635 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM38O00635 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM38O00635 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM38O00635 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM38O00635 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM38O00635 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM38O00635 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
TRIM38O00635 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM38O00635 AC008033.1-201ENST00000216407 1162 ntBASIC4.37□□□□□ -1.71
TRIM38O00635 RNU1-15P-201ENST00000353977 144 ntBASIC4.37□□□□□ -1.71
TRIM38O00635 RNU6-777P-201ENST00000364265 104 ntBASIC4.37□□□□□ -1.71
TRIM38O00635 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM38O00635 HMGN1P14-201ENST00000412459 517 ntBASIC4.37□□□□□ -1.71
TRIM38O00635 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM38O00635 AL109913.1-201ENST00000421173 514 ntBASIC4.37□□□□□ -1.71
TRIM38O00635 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM38O00635 MTCO2P11-201ENST00000431069 680 ntBASIC4.37□□□□□ -1.71
TRIM38O00635 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM38O00635 MTND1P30-201ENST00000441241 901 ntBASIC4.37□□□□□ -1.71
TRIM38O00635 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM38O00635 MTND5P20-201ENST00000448677 143 ntBASIC4.37□□□□□ -1.71
TRIM38O00635 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM38O00635 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms