Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 TAF9BP1-201ENST00000396646 746 ntBASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 AL079342.2-201ENST00000403367 482 ntBASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 RPL7P8-201ENST00000411964 730 ntBASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 RPL31P2-201ENST00000413849 377 ntBASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 MTND2P16-201ENST00000419987 799 ntBASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 AC097713.2-201ENST00000430199 356 ntBASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 RPS29P6-201ENST00000438196 145 ntBASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 RPL23AP76-201ENST00000441860 458 ntBASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 AC079776.3-201ENST00000450665 370 ntBASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 AC233982.1-201ENST00000451247 436 ntBASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 PRSS3P4-201ENST00000453323 162 ntBASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 NF1P3-201ENST00000457709 450 ntBASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 RPS29P2-201ENST00000479278 136 ntBASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 TMEM248P1-201ENST00000510579 951 ntBASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 AC008562.1-201ENST00000521763 330 ntBASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 DEFB130C-202ENST00000530001 230 ntBASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 OR6C73P-201ENST00000546432 358 ntBASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 MTND3P12-201ENST00000559068 328 ntBASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 AL035411.2-201ENST00000604022 421 ntBASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 Z99289.3-201ENST00000605586 594 ntBASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 AC024257.5-201ENST00000612739 531 ntBASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 AC140725.3-201ENST00000616193 880 ntBASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 MIR7975-201ENST00000619350 68 ntBASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 AC021755.1-201ENST00000559747 1447 ntBASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 AL672296.1-201ENST00000427780 2158 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 RNU4-51P-201ENST00000364206 140 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 RNU6-619P-201ENST00000365146 108 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 SNORA48.8-201ENST00000391324 134 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 GSTA8P-201ENST00000404253 637 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 AL590290.1-201ENST00000405336 380 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 HNRNPDP2-201ENST00000406475 478 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 U3.42-201ENST00000408746 214 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 RPS7P15-201ENST00000415804 584 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 EI24P1-201ENST00000416584 867 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 AC093151.1-201ENST00000427711 313 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 BX248409.1-201ENST00000455497 255 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 RPS4XP10-201ENST00000465034 731 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 AC008837.2-201ENST00000513076 418 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 OR5G4P-201ENST00000525251 760 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 AC034105.3-201ENST00000565294 442 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 AL353778.1-201ENST00000603149 408 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 SRGNP1-201ENST00000603392 451 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 HSPE1P14-201ENST00000605812 302 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 AC006927.4-201ENST00000639187 543 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 ZNF663P-202ENST00000641770 1131 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 LINC02211-204ENST00000642024 1070 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 MTCO1P6-201ENST00000481192 1384 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 AC118273.1-201ENST00000525324 3006 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 MTND5P7-201ENST00000413558 1798 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 AP005901.5-201ENST00000545779 1796 ntBASIC2.97□□□□□ -1.93
TRIM49D1C9J1S8 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.96□□□□□ -1.93
TRIM49D1C9J1S8 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.96□□□□□ -1.93
TRIM49D1C9J1S8 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
TRIM49D1C9J1S8 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms