Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 RPPH1-2P-201ENST00000516688 293 ntBASIC1.73□□□□□ -2.13
COL6A5A8TX70 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
COL6A5A8TX70 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC1.73□□□□□ -2.13
COL6A5A8TX70 RPAP2P1-201ENST00000603626 1168 ntBASIC1.73□□□□□ -2.13
COL6A5A8TX70 AL359740.1-201ENST00000624340 592 ntBASIC1.73□□□□□ -2.13
COL6A5A8TX70 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC1.73□□□□□ -2.13
COL6A5A8TX70 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
COL6A5A8TX70 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
COL6A5A8TX70 RNU2-32P-201ENST00000411193 191 ntBASIC1.73□□□□□ -2.13
COL6A5A8TX70 AL451074.5-201ENST00000415894 435 ntBASIC1.73□□□□□ -2.13
COL6A5A8TX70 MTCO2P17-201ENST00000424336 677 ntBASIC1.73□□□□□ -2.13
COL6A5A8TX70 AL445646.1-201ENST00000431784 216 ntBASIC1.73□□□□□ -2.13
COL6A5A8TX70 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.73□□□□□ -2.13
COL6A5A8TX70 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC1.73□□□□□ -2.13
COL6A5A8TX70 AC117532.1-201ENST00000514638 323 ntBASIC1.73□□□□□ -2.13
COL6A5A8TX70 RN7SKP40-201ENST00000517211 242 ntBASIC1.73□□□□□ -2.13
COL6A5A8TX70 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC1.73□□□□□ -2.13
COL6A5A8TX70 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC1.73□□□□□ -2.13
COL6A5A8TX70 MIR4255-201ENST00000579351 72 ntBASIC1.73□□□□□ -2.13
COL6A5A8TX70 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.73□□□□□ -2.13
COL6A5A8TX70 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC1.73□□□□□ -2.13
COL6A5A8TX70 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
COL6A5A8TX70 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
COL6A5A8TX70 AP005901.5-201ENST00000545779 1796 ntBASIC1.73□□□□□ -2.13
COL6A5A8TX70 MTND5P23-201ENST00000430812 1655 ntBASIC1.73□□□□□ -2.13
COL6A5A8TX70 KPNA2P1-201ENST00000458289 1591 ntBASIC1.73□□□□□ -2.13
COL6A5A8TX70 MTCO3P31-201ENST00000405526 789 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 RNU2-2P-201ENST00000410396 191 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.72□□□□□ -2.13
COL6A5A8TX70 OR4K11P-201ENST00000431829 904 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
COL6A5A8TX70 RPS15AP28-201ENST00000435088 386 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.72□□□□□ -2.13
COL6A5A8TX70 AC017007.3-201ENST00000479865 435 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 SUMO2P4-201ENST00000504193 276 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.72□□□□□ -2.13
COL6A5A8TX70 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC1.72□□□□□ -2.13
COL6A5A8TX70 U2.15-201ENST00000611544 191 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 U2.16-201ENST00000613119 191 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 U2.12-201ENST00000613778 191 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 U2.20-201ENST00000613956 192 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 U2.9-201ENST00000615427 191 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 U2.11-201ENST00000616345 191 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 U2.2-201ENST00000616535 191 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 AC108479.2-201ENST00000617314 601 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 U2.3-201ENST00000617785 191 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 U2.19-201ENST00000618602 191 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 RNU2-1-201ENST00000618664 191 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 U2.6-201ENST00000619225 191 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 U2.5-201ENST00000619465 191 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 U2.10-201ENST00000620268 191 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
COL6A5A8TX70 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 RNU6-984P-201ENST00000363236 109 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 RNA5SP456-201ENST00000364002 114 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 RN7SKP226-201ENST00000364912 300 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC1.72□□□□□ -2.13
COL6A5A8TX70 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
COL6A5A8TX70 FO393414.1-201ENST00000428697 1184 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 AC092473.1-201ENST00000441098 221 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 COX6CP2-201ENST00000444980 225 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 SNRPFP4-201ENST00000456366 242 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 OR52A4P-203ENST00000498233 1014 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.72□□□□□ -2.13
COL6A5A8TX70 RNU4ATAC15P-201ENST00000516415 126 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC1.72□□□□□ -2.13
COL6A5A8TX70 PHKBP1-201ENST00000450951 1951 ntBASIC1.72□□□□□ -2.13
COL6A5A8TX70 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC1.71□□□□□ -2.13
COL6A5A8TX70 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.71□□□□□ -2.13
COL6A5A8TX70 FTH1P12-201ENST00000432137 551 ntBASIC1.71□□□□□ -2.13
COL6A5A8TX70 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.71□□□□□ -2.13
COL6A5A8TX70 AC093767.1-201ENST00000504523 156 ntBASIC1.71□□□□□ -2.13
COL6A5A8TX70 SNORA9.3-201ENST00000516383 129 ntBASIC1.71□□□□□ -2.13
COL6A5A8TX70 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.71□□□□□ -2.13
COL6A5A8TX70 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.71□□□□□ -2.13
COL6A5A8TX70 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.71□□□□□ -2.13
COL6A5A8TX70 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC1.71□□□□□ -2.13
COL6A5A8TX70 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.71□□□□□ -2.13
COL6A5A8TX70 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC1.71□□□□□ -2.14
COL6A5A8TX70 AC011978.2-201ENST00000569835 2054 ntBASIC1.71□□□□□ -2.14
COL6A5A8TX70 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
COL6A5A8TX70 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
COL6A5A8TX70 RNU6-805P-201ENST00000365643 106 ntBASIC1.71□□□□□ -2.14
COL6A5A8TX70 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.71□□□□□ -2.14
COL6A5A8TX70 Y_RNA.471-201ENST00000384312 102 ntBASIC1.71□□□□□ -2.14
COL6A5A8TX70 RNU6-516P-201ENST00000411381 104 ntBASIC1.71□□□□□ -2.14
COL6A5A8TX70 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.71□□□□□ -2.14
COL6A5A8TX70 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.71□□□□□ -2.14
COL6A5A8TX70 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.71□□□□□ -2.14
COL6A5A8TX70 AC091544.1-201ENST00000484702 348 ntBASIC1.71□□□□□ -2.14
COL6A5A8TX70 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.71□□□□□ -2.14
COL6A5A8TX70 AP001804.3-201ENST00000525146 880 ntBASIC1.71□□□□□ -2.14
COL6A5A8TX70 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.71□□□□□ -2.14
COL6A5A8TX70 OR4H12P-201ENST00000556269 907 ntBASIC1.71□□□□□ -2.14
COL6A5A8TX70 AGGF1P8-201ENST00000562979 1000 ntBASIC1.71□□□□□ -2.14
COL6A5A8TX70 MIR4644-201ENST00000579929 84 ntBASIC1.71□□□□□ -2.14
COL6A5A8TX70 AC011472.4-201ENST00000615848 491 ntBASIC1.71□□□□□ -2.14
COL6A5A8TX70 Z99129.2-201ENST00000619967 314 ntBASIC1.71□□□□□ -2.14
COL6A5A8TX70 MIR7153-201ENST00000637758 57 ntBASIC1.71□□□□□ -2.14
COL6A5A8TX70 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms