Protein–RNA interactions for Protein: Q9Y3E7

CHMP3, Charged multivesicular body protein 3, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3Q9Y3E7 AC015908.5-201ENST00000623289 343 ntBASIC6.26□□□□□ -1.41
CHMP3Q9Y3E7 CYP3A51P-201ENST00000633513 256 ntBASIC6.26□□□□□ -1.41
CHMP3Q9Y3E7 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.26□□□□□ -1.41
CHMP3Q9Y3E7 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CHMP3Q9Y3E7 OR9K1P-202ENST00000641111 3217 ntBASIC6.26□□□□□ -1.41
CHMP3Q9Y3E7 AC093849.1-201ENST00000563631 2209 ntBASIC6.26□□□□□ -1.41
CHMP3Q9Y3E7 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHMP3Q9Y3E7 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.26□□□□□ -1.41
CHMP3Q9Y3E7 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 RNU6-552P-201ENST00000362869 119 ntBASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 MIR568-201ENST00000385036 95 ntBASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 MT-TR-201ENST00000387439 65 ntBASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 RNU6-903P-201ENST00000391270 109 ntBASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 MTATP6P16-201ENST00000434543 526 ntBASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 FTH1P1-201ENST00000437933 532 ntBASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 TRAPPC2P8-201ENST00000440676 396 ntBASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 MRPS31P2-201ENST00000451581 518 ntBASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 RNU6-1208P-201ENST00000459588 107 ntBASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 AC092324.1-201ENST00000468671 324 ntBASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 OR7H2P-201ENST00000513483 306 ntBASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 RNU6-1088P-201ENST00000516850 104 ntBASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 AC012339.2-201ENST00000523996 453 ntBASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 COX6CP5-201ENST00000527162 228 ntBASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 AC053481.3-201ENST00000577881 843 ntBASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 MIR4503-201ENST00000582187 83 ntBASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 AC130324.3-201ENST00000614165 542 ntBASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 uc_338.22-201ENST00000622722 187 ntBASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 AC091925.1-201ENST00000623204 462 ntBASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 MTND4P1-201ENST00000457501 1466 ntBASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CHMP3Q9Y3E7 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 AC066616.2-201ENST00000559334 1481 ntBASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 ELL2P4-201ENST00000446870 1376 ntBASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 Y_RNA.197-201ENST00000364004 102 ntBASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 SNORA62.1-201ENST00000364287 154 ntBASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 RNU6-331P-201ENST00000384724 107 ntBASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 SNORA48.4-201ENST00000391089 134 ntBASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 AL592114.1-201ENST00000403842 483 ntBASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 AL606923.1-201ENST00000406616 190 ntBASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 PLGLA-201ENST00000465668 449 ntBASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 AC090602.1-201ENST00000469695 252 ntBASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 AC083904.1-201ENST00000487828 231 ntBASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 RNU6-864P-201ENST00000516256 108 ntBASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 DERA-209ENST00000532964 854 ntTSL 5 BASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 AC004908.2-201ENST00000609090 574 ntBASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 ADAM5-202ENST00000399789 1942 ntBASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 AC099654.2-201ENST00000433031 1980 ntBASIC6.24□□□□□ -1.41
CHMP3Q9Y3E7 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 Y_RNA.414-201ENST00000384011 101 ntBASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 RNU6-1293P-201ENST00000384077 107 ntBASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 MIR454-201ENST00000390180 115 ntBASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 RNU6-370P-201ENST00000411008 104 ntBASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 AL049714.1-201ENST00000466686 347 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms