Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC6.4□□□□□ -1.38
VPS9D1Q9Y2B5 AC006512.2-201ENST00000543250 486 ntBASIC6.4□□□□□ -1.38
VPS9D1Q9Y2B5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC6.4□□□□□ -1.38
VPS9D1Q9Y2B5 AC104581.2-201ENST00000572227 430 ntBASIC6.4□□□□□ -1.38
VPS9D1Q9Y2B5 RPL29P33-201ENST00000587474 316 ntBASIC6.4□□□□□ -1.38
VPS9D1Q9Y2B5 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.4□□□□□ -1.38
VPS9D1Q9Y2B5 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
VPS9D1Q9Y2B5 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.4□□□□□ -1.38
VPS9D1Q9Y2B5 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.4□□□□□ -1.38
VPS9D1Q9Y2B5 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
VPS9D1Q9Y2B5 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
VPS9D1Q9Y2B5 AL031119.1-201ENST00000404707 1879 ntBASIC6.4□□□□□ -1.39
VPS9D1Q9Y2B5 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
VPS9D1Q9Y2B5 AP000547.3-204ENST00000588548 2523 ntBASIC6.4□□□□□ -1.39
VPS9D1Q9Y2B5 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
VPS9D1Q9Y2B5 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
VPS9D1Q9Y2B5 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
VPS9D1Q9Y2B5 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.4□□□□□ -1.39
VPS9D1Q9Y2B5 AC092724.1-201ENST00000624623 3397 ntBASIC6.4□□□□□ -1.39
VPS9D1Q9Y2B5 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
VPS9D1Q9Y2B5 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
VPS9D1Q9Y2B5 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 ZNF402P-201ENST00000404435 3100 ntBASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 AC011933.2-201ENST00000578539 2790 ntBASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 RNA5SP308-201ENST00000362532 115 ntBASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 AC092634.1-201ENST00000366505 199 ntBASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 U3.43-201ENST00000410734 213 ntBASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 RNU6-607P-201ENST00000411283 108 ntBASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 AL133173.1-201ENST00000423458 397 ntBASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 AC005002.2-201ENST00000438228 269 ntBASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 EEF1B2P3-201ENST00000447718 678 ntBASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 U8.21-201ENST00000459536 136 ntBASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 ANXA2P1-201ENST00000505539 926 ntBASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 Y_RNA.706-201ENST00000516933 99 ntBASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 AC009120.3-201ENST00000563335 499 ntBASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 AC067852.3-201ENST00000589177 561 ntBASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 AC036176.3-201ENST00000602456 418 ntBASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 SNORA74.4-201ENST00000607595 199 ntBASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 AC039056.2-201ENST00000622261 511 ntBASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.39□□□□□ -1.39
VPS9D1Q9Y2B5 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 RNU6-21P-201ENST00000384710 107 ntBASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 U3.35-201ENST00000408405 208 ntBASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 FAM183DP-201ENST00000421987 399 ntBASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 AC024067.1-201ENST00000426199 223 ntBASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 SEPT7P4-201ENST00000437076 306 ntBASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 AC127537.2-201ENST00000439258 465 ntBASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 AL357134.1-201ENST00000445848 426 ntBASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 UQCRBP2-201ENST00000447827 297 ntBASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 AC010733.1-201ENST00000451515 401 ntBASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 RN7SL83P-201ENST00000468131 297 ntBASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 AP003385.3-201ENST00000472498 287 ntBASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 AC114324.2-202ENST00000503812 134 ntBASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 AC092349.1-201ENST00000504903 310 ntBASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 AC127455.1-201ENST00000565496 145 ntBASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 AL133393.1-201ENST00000603277 287 ntBASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 AC023043.4-201ENST00000612081 449 ntBASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC6.38□□□□□ -1.39
VPS9D1Q9Y2B5 LINC02495-203ENST00000636704 242 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms