Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 RNA5SP258-201ENST00000362750 119 ntBASIC3.56□□□□□ -1.84
SMC3Q9UQE7 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMC3Q9UQE7 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.56□□□□□ -1.84
SMC3Q9UQE7 MIR649-201ENST00000384843 97 ntBASIC3.56□□□□□ -1.84
SMC3Q9UQE7 RN7SKP58-201ENST00000411010 305 ntBASIC3.56□□□□□ -1.84
SMC3Q9UQE7 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.56□□□□□ -1.84
SMC3Q9UQE7 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SMC3Q9UQE7 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.56□□□□□ -1.84
SMC3Q9UQE7 RPL21P2-201ENST00000440049 481 ntBASIC3.56□□□□□ -1.84
SMC3Q9UQE7 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.56□□□□□ -1.84
SMC3Q9UQE7 CDC27P1-201ENST00000445384 715 ntBASIC3.56□□□□□ -1.84
SMC3Q9UQE7 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.56□□□□□ -1.84
SMC3Q9UQE7 OR51B8P-201ENST00000449892 769 ntBASIC3.56□□□□□ -1.84
SMC3Q9UQE7 AC104073.1-201ENST00000451988 151 ntBASIC3.56□□□□□ -1.84
SMC3Q9UQE7 snoU13.4-201ENST00000458916 104 ntBASIC3.56□□□□□ -1.84
SMC3Q9UQE7 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.56□□□□□ -1.84
SMC3Q9UQE7 RPS17P11-201ENST00000474297 293 ntBASIC3.56□□□□□ -1.84
SMC3Q9UQE7 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SMC3Q9UQE7 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.56□□□□□ -1.84
SMC3Q9UQE7 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SMC3Q9UQE7 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.56□□□□□ -1.84
SMC3Q9UQE7 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.56□□□□□ -1.84
SMC3Q9UQE7 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.56□□□□□ -1.84
SMC3Q9UQE7 BPTFP1-201ENST00000579209 492 ntBASIC3.56□□□□□ -1.84
SMC3Q9UQE7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.56□□□□□ -1.84
SMC3Q9UQE7 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.56□□□□□ -1.84
SMC3Q9UQE7 AC133794.1-201ENST00000602731 914 ntBASIC3.56□□□□□ -1.84
SMC3Q9UQE7 DPRXP5-201ENST00000604662 539 ntBASIC3.56□□□□□ -1.84
SMC3Q9UQE7 AL136370.1-201ENST00000608166 691 ntBASIC3.56□□□□□ -1.84
SMC3Q9UQE7 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.56□□□□□ -1.84
SMC3Q9UQE7 AL161637.1-201ENST00000622380 412 ntBASIC3.56□□□□□ -1.84
SMC3Q9UQE7 AC068880.4-201ENST00000623082 495 ntBASIC3.56□□□□□ -1.84
SMC3Q9UQE7 AP000676.4-201ENST00000624659 623 ntBASIC3.56□□□□□ -1.84
SMC3Q9UQE7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.56□□□□□ -1.84
SMC3Q9UQE7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMC3Q9UQE7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 RNU6-730P-201ENST00000383954 104 ntBASIC3.55□□□□□ -1.84
SMC3Q9UQE7 RNU6-1027P-201ENST00000383998 107 ntBASIC3.55□□□□□ -1.84
SMC3Q9UQE7 RNU6-468P-201ENST00000384003 109 ntBASIC3.55□□□□□ -1.84
SMC3Q9UQE7 RPL22P22-201ENST00000395439 379 ntBASIC3.55□□□□□ -1.84
SMC3Q9UQE7 FNDC3CP-201ENST00000420795 1155 ntBASIC3.55□□□□□ -1.84
SMC3Q9UQE7 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 USP9YP36-201ENST00000424581 829 ntBASIC3.55□□□□□ -1.84
SMC3Q9UQE7 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 SAR1AP4-201ENST00000429225 591 ntBASIC3.55□□□□□ -1.84
SMC3Q9UQE7 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 AL050341.1-201ENST00000447743 313 ntBASIC3.55□□□□□ -1.84
SMC3Q9UQE7 AC004022.1-201ENST00000447766 1066 ntBASIC3.55□□□□□ -1.84
SMC3Q9UQE7 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 RPL21P41-201ENST00000459863 264 ntBASIC3.55□□□□□ -1.84
SMC3Q9UQE7 AP004217.1-201ENST00000480579 346 ntBASIC3.55□□□□□ -1.84
SMC3Q9UQE7 RPL7P23-201ENST00000493874 747 ntBASIC3.55□□□□□ -1.84
SMC3Q9UQE7 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 RNU5A-7P-201ENST00000515979 116 ntBASIC3.55□□□□□ -1.84
SMC3Q9UQE7 RNU6-56P-201ENST00000516986 93 ntBASIC3.55□□□□□ -1.84
SMC3Q9UQE7 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 AC022690.1-201ENST00000526681 550 ntBASIC3.55□□□□□ -1.84
SMC3Q9UQE7 AC092451.2-201ENST00000538746 658 ntBASIC3.55□□□□□ -1.84
SMC3Q9UQE7 AL121603.1-201ENST00000553815 142 ntBASIC3.55□□□□□ -1.84
SMC3Q9UQE7 AC087481.2-201ENST00000565492 330 ntBASIC3.55□□□□□ -1.84
SMC3Q9UQE7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 AC096947.1-201ENST00000603233 470 ntBASIC3.55□□□□□ -1.84
SMC3Q9UQE7 AC025588.3-201ENST00000604182 274 ntBASIC3.55□□□□□ -1.84
SMC3Q9UQE7 AL109618.2-201ENST00000605527 211 ntBASIC3.55□□□□□ -1.84
SMC3Q9UQE7 AC018755.4-201ENST00000619715 454 ntBASIC3.55□□□□□ -1.84
SMC3Q9UQE7 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 MIR622-201ENST00000638396 96 ntBASIC3.55□□□□□ -1.84
SMC3Q9UQE7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
SMC3Q9UQE7 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
SMC3Q9UQE7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SMC3Q9UQE7 AL645568.2-201ENST00000432815 1337 ntBASIC3.54□□□□□ -1.84
SMC3Q9UQE7 AC073325.2-201ENST00000339545 159 ntBASIC3.54□□□□□ -1.84
SMC3Q9UQE7 SNORA63.3-201ENST00000362682 132 ntBASIC3.54□□□□□ -1.84
SMC3Q9UQE7 SNORA51.4-201ENST00000364993 124 ntBASIC3.54□□□□□ -1.84
SMC3Q9UQE7 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.54□□□□□ -1.84
SMC3Q9UQE7 OR51A3P-201ENST00000413596 924 ntBASIC3.54□□□□□ -1.84
SMC3Q9UQE7 MTCO3P12-201ENST00000416718 547 ntBASIC3.54□□□□□ -1.84
SMC3Q9UQE7 AC069157.1-201ENST00000421749 137 ntBASIC3.54□□□□□ -1.84
SMC3Q9UQE7 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.54□□□□□ -1.84
SMC3Q9UQE7 AC005300.1-201ENST00000428401 373 ntBASIC3.54□□□□□ -1.84
SMC3Q9UQE7 AL050321.1-201ENST00000432363 400 ntBASIC3.54□□□□□ -1.84
SMC3Q9UQE7 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SMC3Q9UQE7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms