Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AL161734.1-201ENST00000609720 557 ntBASIC2.09□□□□□ -2.07
COMMD3Q9UBI1 AL359535.1-201ENST00000612100 1087 ntBASIC2.09□□□□□ -2.07
COMMD3Q9UBI1 AC006133.1-201ENST00000617106 264 ntBASIC2.09□□□□□ -2.07
COMMD3Q9UBI1 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.09□□□□□ -2.07
COMMD3Q9UBI1 AC007275.1-201ENST00000621243 671 ntBASIC2.09□□□□□ -2.07
COMMD3Q9UBI1 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.08
COMMD3Q9UBI1 MTND4P31-201ENST00000425607 1343 ntBASIC2.09□□□□□ -2.08
COMMD3Q9UBI1 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
COMMD3Q9UBI1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 RNA5SP72-201ENST00000364442 117 ntBASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 MIR7-3-201ENST00000384898 110 ntBASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 UBA52P6-201ENST00000399822 382 ntBASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 RNA5SP38-201ENST00000410750 119 ntBASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 NDUFA5P10-201ENST00000432147 357 ntBASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 ARL4AP4-201ENST00000434170 518 ntBASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 CDC27P1-201ENST00000445384 715 ntBASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 PRSS3P4-201ENST00000453323 162 ntBASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 RPL23AP45-201ENST00000476406 468 ntBASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 AC104435.1-201ENST00000483483 166 ntBASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 AC105914.1-201ENST00000511798 226 ntBASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 AP003385.6-201ENST00000531603 374 ntBASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 RPL23AP84-201ENST00000571193 464 ntBASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 AC007336.1-201ENST00000576365 3828 ntBASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 AC245036.5-201ENST00000596330 847 ntBASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 AC008083.4-201ENST00000615076 444 ntBASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 AC069528.2-201ENST00000624849 1991 ntBASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 AL359693.1-201ENST00000614959 2407 ntBASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.08□□□□□ -2.08
COMMD3Q9UBI1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 AL049780.3-201ENST00000624612 1583 ntBASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 MIR9-1-201ENST00000385198 89 ntBASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 UBE2D3P2-201ENST00000424409 445 ntBASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 DSTNP2-201ENST00000504533 515 ntBASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 AC113398.2-201ENST00000507630 558 ntBASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 AC016065.2-201ENST00000514530 444 ntBASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 SNORA67.7-201ENST00000516664 135 ntBASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 RN7SKP40-201ENST00000517211 242 ntBASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 AC026241.1-201ENST00000517873 2142 ntBASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 AP002812.4-201ENST00000532139 286 ntBASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 AL121594.4-201ENST00000556211 1196 ntBASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 AC245389.1-201ENST00000605141 529 ntBASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 AC067747.1-201ENST00000608026 250 ntBASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 AC006329.2-201ENST00000611491 394 ntBASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 U4.3-201ENST00000621047 82 ntBASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COMMD3Q9UBI1 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
COMMD3Q9UBI1 OR5H15-201ENST00000383696 930 ntBASIC2.06□□□□□ -2.08
COMMD3Q9UBI1 RNVU1-14-201ENST00000384770 164 ntBASIC2.06□□□□□ -2.08
COMMD3Q9UBI1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
COMMD3Q9UBI1 RPL26P37-201ENST00000411983 438 ntBASIC2.06□□□□□ -2.08
COMMD3Q9UBI1 AC007064.1-201ENST00000412238 351 ntBASIC2.06□□□□□ -2.08
COMMD3Q9UBI1 MORF4L1P6-201ENST00000418771 268 ntBASIC2.06□□□□□ -2.08
COMMD3Q9UBI1 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.06□□□□□ -2.08
COMMD3Q9UBI1 MORF4L1P7-201ENST00000426038 703 ntBASIC2.06□□□□□ -2.08
COMMD3Q9UBI1 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.06□□□□□ -2.08
COMMD3Q9UBI1 RPS24P13-201ENST00000442520 397 ntBASIC2.06□□□□□ -2.08
COMMD3Q9UBI1 AC011753.1-201ENST00000451001 220 ntBASIC2.06□□□□□ -2.08
COMMD3Q9UBI1 SNORA84-201ENST00000459229 133 ntBASIC2.06□□□□□ -2.08
COMMD3Q9UBI1 GZMAP1-201ENST00000503054 631 ntBASIC2.06□□□□□ -2.08
COMMD3Q9UBI1 NAMPTP2-201ENST00000505629 1115 ntBASIC2.06□□□□□ -2.08
COMMD3Q9UBI1 AC096725.1-201ENST00000514266 313 ntBASIC2.06□□□□□ -2.08
COMMD3Q9UBI1 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.06□□□□□ -2.08
COMMD3Q9UBI1 SNORA31.20-201ENST00000517111 133 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms