Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 AL138820.1-201ENST00000617901 5305 ntBASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 AL359893.1-201ENST00000447628 1580 ntBASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 Y_RNA.39-201ENST00000362620 98 ntBASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 SNORA51.1-201ENST00000363243 140 ntBASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 Y_RNA.152-201ENST00000363578 100 ntBASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 Y_RNA.214-201ENST00000364201 112 ntBASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 RNA5SP510-201ENST00000364697 99 ntBASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 RNU6-701P-201ENST00000384059 107 ntBASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 RPL11P3-201ENST00000395256 523 ntBASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 AL139039.1-201ENST00000401900 692 ntBASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 RPS4XP7-201ENST00000406274 780 ntBASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 RNU2-38P-201ENST00000410856 79 ntBASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 RN7SKP17-201ENST00000411242 351 ntBASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 RPSAP65-201ENST00000429660 595 ntBASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 RPL23AP50-201ENST00000434149 455 ntBASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 AL391987.1-201ENST00000441025 200 ntBASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 AC025423.5-201ENST00000550230 219 ntBASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 MRPS21P8-201ENST00000569196 235 ntBASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 AC006254.3-201ENST00000603353 884 ntBASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 Z98751.3-201ENST00000604447 521 ntBASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 AL158032.1-201ENST00000605401 106 ntBASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 AL161637.1-201ENST00000622380 412 ntBASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 EIF2AP4-201ENST00000424793 1781 ntBASIC5.6□□□□□ -1.51
NEUROD4Q9HD90 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 RBMY1HP-201ENST00000382759 1389 ntBASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 AL157777.2-201ENST00000258070 137 ntBASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 AC138393.1-203ENST00000327086 343 ntBASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 RNU6-806P-201ENST00000365147 105 ntBASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 Y_RNA.376-201ENST00000365638 108 ntBASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 RNU6-637P-201ENST00000384050 107 ntBASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 SNORD51-201ENST00000384320 80 ntBASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 ELOCP20-201ENST00000422460 345 ntBASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 RHOT1P3-201ENST00000436571 331 ntBASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 AL663074.2-201ENST00000440621 479 ntBASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 AL359672.1-201ENST00000442302 409 ntBASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 FABP5P13-201ENST00000452144 328 ntBASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 PPIAP7-201ENST00000454070 489 ntBASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 Y_RNA.715-201ENST00000517082 110 ntBASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 AP000620.1-201ENST00000527147 504 ntBASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 SUB1P3-201ENST00000564581 315 ntBASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 AC025857.2-201ENST00000602711 238 ntBASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 AC104687.2-201ENST00000604442 342 ntBASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 AC073488.6-201ENST00000632293 754 ntBASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 AC125336.1-201ENST00000508893 2827 ntBASIC5.59□□□□□ -1.51
NEUROD4Q9HD90 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
NEUROD4Q9HD90 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
NEUROD4Q9HD90 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NEUROD4Q9HD90 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
NEUROD4Q9HD90 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.58□□□□□ -1.52
NEUROD4Q9HD90 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
NEUROD4Q9HD90 ASNSP1-201ENST00000518311 1939 ntBASIC5.58□□□□□ -1.52
NEUROD4Q9HD90 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NEUROD4Q9HD90 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NEUROD4Q9HD90 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NEUROD4Q9HD90 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms