Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 Y_RNA.702-201ENST00000516843 96 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 IGHV3-32-201ENST00000519182 355 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 HIGD1AP6-201ENST00000521833 279 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.18□□□□□ -1.74
EBF3Q9H4W6 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.18□□□□□ -1.74
EBF3Q9H4W6 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.18□□□□□ -1.74
EBF3Q9H4W6 ZNF519P2-201ENST00000557032 169 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 HNRNPCP4-201ENST00000571636 900 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 RPL23AP87-202ENST00000573039 466 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 AC025627.2-201ENST00000576220 160 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 C8orf59P2-201ENST00000603441 271 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 AC024560.3-201ENST00000608482 349 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 AC005332.6-201ENST00000613178 446 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 MIR6075-201ENST00000620782 95 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 DUXAP9-208ENST00000622815 614 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 MKKS-204ENST00000639674 192 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.18□□□□□ -1.74
EBF3Q9H4W6 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
EBF3Q9H4W6 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.18□□□□□ -1.74
EBF3Q9H4W6 AC074029.4-201ENST00000624796 1859 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 RNU6-582P-201ENST00000362989 107 ntBASIC4.17□□□□□ -1.74
EBF3Q9H4W6 SNORD35B-201ENST00000363660 87 ntBASIC4.17□□□□□ -1.74
EBF3Q9H4W6 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.17□□□□□ -1.74
EBF3Q9H4W6 Y_RNA.302-201ENST00000364997 102 ntBASIC4.17□□□□□ -1.74
EBF3Q9H4W6 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 AL139098.1-201ENST00000407291 389 ntBASIC4.17□□□□□ -1.74
EBF3Q9H4W6 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 RPS26P47-201ENST00000427219 348 ntBASIC4.17□□□□□ -1.74
EBF3Q9H4W6 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 RPL7P59-201ENST00000447700 943 ntBASIC4.17□□□□□ -1.74
EBF3Q9H4W6 AL133547.1-201ENST00000448546 220 ntBASIC4.17□□□□□ -1.74
EBF3Q9H4W6 EIF4A1P11-201ENST00000451239 222 ntBASIC4.17□□□□□ -1.74
EBF3Q9H4W6 ELOCP23-201ENST00000452014 332 ntBASIC4.17□□□□□ -1.74
EBF3Q9H4W6 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 AC005229.2-201ENST00000456995 399 ntBASIC4.17□□□□□ -1.74
EBF3Q9H4W6 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 AL139099.1-201ENST00000497398 403 ntBASIC4.17□□□□□ -1.74
EBF3Q9H4W6 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 RNU6-885P-201ENST00000516607 104 ntBASIC4.17□□□□□ -1.74
EBF3Q9H4W6 AP001189.2-201ENST00000527320 189 ntBASIC4.17□□□□□ -1.74
EBF3Q9H4W6 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 AC124947.2-202ENST00000552735 133 ntBASIC4.17□□□□□ -1.74
EBF3Q9H4W6 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 HMGB3P26-201ENST00000560051 582 ntBASIC4.17□□□□□ -1.74
EBF3Q9H4W6 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 AC123786.2-201ENST00000603459 275 ntBASIC4.17□□□□□ -1.74
EBF3Q9H4W6 AC024220.1-201ENST00000603675 484 ntBASIC4.17□□□□□ -1.74
EBF3Q9H4W6 AP000907.4-201ENST00000604143 237 ntBASIC4.17□□□□□ -1.74
EBF3Q9H4W6 AL451044.1-201ENST00000604867 238 ntBASIC4.17□□□□□ -1.74
EBF3Q9H4W6 AC009994.1-201ENST00000606889 253 ntBASIC4.17□□□□□ -1.74
EBF3Q9H4W6 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.17□□□□□ -1.74
EBF3Q9H4W6 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 AC012150.2-201ENST00000621300 544 ntBASIC4.17□□□□□ -1.74
EBF3Q9H4W6 AC012442.3-202ENST00000636742 206 ntBASIC4.17□□□□□ -1.74
EBF3Q9H4W6 FAM157B-203ENST00000639350 358 ntBASIC4.17□□□□□ -1.74
EBF3Q9H4W6 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
EBF3Q9H4W6 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 SNORA71.3-201ENST00000362582 128 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 RNA5SP124-201ENST00000362739 110 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 Y_RNA.61-201ENST00000362835 102 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 RNU1-89P-201ENST00000384592 164 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 RNU6-1151P-201ENST00000384684 107 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 AC007066.1-201ENST00000392902 381 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 RPL23AP47-201ENST00000408017 460 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 RNU2-41P-201ENST00000410991 178 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.16□□□□□ -1.74
EBF3Q9H4W6 AC068533.2-201ENST00000411872 306 ntBASIC4.16□□□□□ -1.74
EBF3Q9H4W6 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms