Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RNU6-483P-201ENST00000384088 108 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 Y_RNA.481-201ENST00000384373 102 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 MIR93-201ENST00000385024 80 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 RPL31P2-201ENST00000413849 377 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 AL356276.2-201ENST00000435919 558 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 PTMAP3-201ENST00000447474 330 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 DPPA3P1-201ENST00000448050 469 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 AC063943.1-201ENST00000465434 453 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 RPL23AP72-201ENST00000492447 435 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 SCARNA22-201ENST00000503991 125 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 AC010587.1-201ENST00000505809 469 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 SLC25A15P5-201ENST00000508033 253 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 NPM1P41-201ENST00000512920 831 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 SETP2-201ENST00000553886 926 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 MIR4716-201ENST00000579628 84 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 MIR4512-201ENST00000583257 77 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 BNIP3P22-201ENST00000593399 556 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 AL512782.1-201ENST00000603093 364 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 AC007566.2-201ENST00000603642 413 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 AC055876.5-201ENST00000605667 259 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 AL355472.4-201ENST00000610233 626 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 MIR6758-201ENST00000620653 63 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 AC139792.3-201ENST00000623525 224 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 AC091953.2-201ENST00000623979 160 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 ASNSP1-201ENST00000518311 1939 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 RNU5E-1-201ENST00000362477 120 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 BX510359.2-201ENST00000417920 305 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 HMGB3P20-201ENST00000417997 600 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 AC069213.2-201ENST00000420238 366 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 MTND6P18-201ENST00000439477 513 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 USP9YP15-201ENST00000442391 422 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 H2AFZP5-201ENST00000446960 382 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 ISCUP1-201ENST00000454451 448 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 RPL5P30-201ENST00000465511 891 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 AC015795.1-201ENST00000513669 327 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 RNA5SP154-201ENST00000516193 111 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 RNU6-358P-201ENST00000516564 75 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 Y_RNA.702-201ENST00000516843 96 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 MYL12AP1-201ENST00000518490 515 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 IGLVIV-53-201ENST00000520107 367 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 AP006289.1-201ENST00000538089 277 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 ADI1P3-201ENST00000549509 470 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 AC105129.1-201ENST00000560250 297 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 AL356432.3-201ENST00000568952 465 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 AC091042.1-201ENST00000579213 173 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 MIR1254-2-201ENST00000579553 63 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 MIR3167-201ENST00000579623 85 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 AC025588.3-201ENST00000604182 274 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 AC010201.1-201ENST00000605051 540 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 AC113194.1-201ENST00000606037 500 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 AC083809.1-201ENST00000615051 472 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms