Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.01□□□□□ -1.93
EBF4Q9BQW3 RAB9AP3-201ENST00000412737 573 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 BMS1P22-201ENST00000414726 313 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.01□□□□□ -1.93
EBF4Q9BQW3 AC092447.3-201ENST00000426027 686 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 AL390023.1-201ENST00000428836 262 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 MTND2P5-201ENST00000432656 1006 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 SEPT7P5-201ENST00000434048 306 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.01□□□□□ -1.93
EBF4Q9BQW3 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.01□□□□□ -1.93
EBF4Q9BQW3 NANOGP2-201ENST00000435391 727 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.01□□□□□ -1.93
EBF4Q9BQW3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.01□□□□□ -1.93
EBF4Q9BQW3 AC092393.1-201ENST00000439625 742 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 RAB9AP1-201ENST00000449393 573 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.01□□□□□ -1.93
EBF4Q9BQW3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.01□□□□□ -1.93
EBF4Q9BQW3 AC069528.1-202ENST00000482888 637 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 VPS26AP1-201ENST00000483197 979 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 AC108860.1-201ENST00000484521 383 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 MTCO3P44-201ENST00000510977 541 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.01□□□□□ -1.93
EBF4Q9BQW3 RN7SKP287-201ENST00000516546 266 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.01□□□□□ -1.93
EBF4Q9BQW3 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.01□□□□□ -1.93
EBF4Q9BQW3 OR5B10P-201ENST00000532869 642 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.01□□□□□ -1.93
EBF4Q9BQW3 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.01□□□□□ -1.93
EBF4Q9BQW3 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
EBF4Q9BQW3 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.01□□□□□ -1.93
EBF4Q9BQW3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.01□□□□□ -1.93
EBF4Q9BQW3 AC005951.1-201ENST00000576706 485 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 AC083760.1-201ENST00000589621 670 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.01□□□□□ -1.93
EBF4Q9BQW3 AC025588.3-201ENST00000604182 274 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 RNA5SP108-201ENST00000605921 117 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 AL355493.4-201ENST00000618530 292 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.01□□□□□ -1.93
EBF4Q9BQW3 AC022079.1-201ENST00000621546 602 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 AP002791.1-201ENST00000623291 381 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 AC068787.1-201ENST00000623908 691 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 AL512506.2-201ENST00000624472 458 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 CU459211.1-201ENST00000635667 749 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 PABPC1P7-201ENST00000413177 1513 ntBASIC3.01□□□□□ -1.93
EBF4Q9BQW3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
EBF4Q9BQW3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
EBF4Q9BQW3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3□□□□□ -1.93
EBF4Q9BQW3 MTCO1P24-201ENST00000515438 1558 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 AC130650.2-201ENST00000618736 2403 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 AC010733.2-201ENST00000589496 5702 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 PCF11-AS1-201ENST00000602322 1516 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
EBF4Q9BQW3 RNU6-492P-201ENST00000363035 104 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 RNU6-1066P-201ENST00000363573 105 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 SUGT1P1-201ENST00000379514 476 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3□□□□□ -1.93
EBF4Q9BQW3 RNU6-1300P-201ENST00000391046 108 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 ANAPC10P1-201ENST00000395991 556 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 TANK-206ENST00000406287 875 ntTSL 5 BASIC3□□□□□ -1.93
EBF4Q9BQW3 RNU4-22P-201ENST00000411058 166 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3□□□□□ -1.93
EBF4Q9BQW3 MTCO3P1-205ENST00000422088 832 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 RPL7P44-201ENST00000424827 742 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 DPRXP1-201ENST00000426312 460 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3□□□□□ -1.93
EBF4Q9BQW3 AL035410.1-201ENST00000427409 427 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 HSPD1P21-201ENST00000436541 245 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3□□□□□ -1.93
EBF4Q9BQW3 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3□□□□□ -1.93
EBF4Q9BQW3 AL031313.1-201ENST00000448435 256 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
EBF4Q9BQW3 AC146507.1-201ENST00000468335 354 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 RN7SL633P-201ENST00000488974 297 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 AC134050.1-201ENST00000495088 933 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3□□□□□ -1.93
EBF4Q9BQW3 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3□□□□□ -1.93
EBF4Q9BQW3 RNA5SP385-201ENST00000515947 110 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3□□□□□ -1.93
EBF4Q9BQW3 OR4A45P-201ENST00000529954 901 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 AL163153.1-201ENST00000554223 283 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 MIR5186-201ENST00000577504 120 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3□□□□□ -1.93
EBF4Q9BQW3 MIR4506-201ENST00000584693 77 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 MTND3P19-201ENST00000603825 345 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 PRELID3BP8-201ENST00000604148 295 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 AC093424.1-201ENST00000604999 338 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 AC073657.2-201ENST00000605661 303 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 AC091946.2-201ENST00000606105 291 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3□□□□□ -1.93
EBF4Q9BQW3 AC090425.2-201ENST00000608818 501 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 AC092954.1-201ENST00000609121 445 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 AL138478.1-201ENST00000612252 832 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 AC068722.2-201ENST00000618734 544 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3□□□□□ -1.93
EBF4Q9BQW3 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3□□□□□ -1.93
EBF4Q9BQW3 AC026634.1-201ENST00000634369 198 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 AC244258.1-201ENST00000637553 1071 ntBASIC3□□□□□ -1.93
EBF4Q9BQW3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3□□□□□ -1.93
EBF4Q9BQW3 AL355596.1-201ENST00000565399 3996 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms