Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
ABCA3Q99758 Y_RNA.355-201ENST00000365462 98 ntBASIC2.96□□□□□ -1.94
ABCA3Q99758 AL513175.2-201ENST00000422071 443 ntBASIC2.96□□□□□ -1.94
ABCA3Q99758 RPL36AP33-201ENST00000450395 310 ntBASIC2.96□□□□□ -1.94
ABCA3Q99758 SNRPGP9-201ENST00000456025 225 ntBASIC2.96□□□□□ -1.94
ABCA3Q99758 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
ABCA3Q99758 XKRY2-202ENST00000623874 1581 ntBASIC2.96□□□□□ -1.94
ABCA3Q99758 XKRY-202ENST00000624960 1581 ntBASIC2.96□□□□□ -1.94
ABCA3Q99758 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.96□□□□□ -1.94
ABCA3Q99758 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.95□□□□□ -1.94
ABCA3Q99758 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.95□□□□□ -1.94
ABCA3Q99758 AL049830.2-201ENST00000480072 201 ntBASIC2.95□□□□□ -1.94
ABCA3Q99758 RN7SKP82-201ENST00000516786 223 ntBASIC2.95□□□□□ -1.94
ABCA3Q99758 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.95□□□□□ -1.94
ABCA3Q99758 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC2.95□□□□□ -1.94
ABCA3Q99758 AC105137.2-201ENST00000569073 466 ntBASIC2.95□□□□□ -1.94
ABCA3Q99758 SNORD39.2-201ENST00000579995 76 ntBASIC2.95□□□□□ -1.94
ABCA3Q99758 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.95□□□□□ -1.94
ABCA3Q99758 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
ABCA3Q99758 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
ABCA3Q99758 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
ABCA3Q99758 AC091152.2-201ENST00000591628 2569 ntBASIC2.94□□□□□ -1.94
ABCA3Q99758 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
ABCA3Q99758 AC011155.1-201ENST00000316512 456 ntBASIC2.94□□□□□ -1.94
ABCA3Q99758 AC108667.1-201ENST00000428618 249 ntBASIC2.94□□□□□ -1.94
ABCA3Q99758 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.94□□□□□ -1.94
ABCA3Q99758 AC098826.1-201ENST00000433943 471 ntBASIC2.94□□□□□ -1.94
ABCA3Q99758 AC244505.4-201ENST00000434905 287 ntBASIC2.94□□□□□ -1.94
ABCA3Q99758 SSXP5-201ENST00000443473 287 ntBASIC2.94□□□□□ -1.94
ABCA3Q99758 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.94□□□□□ -1.94
ABCA3Q99758 AC007677.1-201ENST00000445757 515 ntBASIC2.94□□□□□ -1.94
ABCA3Q99758 SNORD13-201ENST00000459299 104 ntBASIC2.94□□□□□ -1.94
ABCA3Q99758 RNA5SP200-201ENST00000516360 103 ntBASIC2.94□□□□□ -1.94
ABCA3Q99758 NDUFA5P6-201ENST00000542110 379 ntBASIC2.94□□□□□ -1.94
ABCA3Q99758 AC091488.1-201ENST00000604239 660 ntBASIC2.94□□□□□ -1.94
ABCA3Q99758 AC245517.5-201ENST00000611529 162 ntBASIC2.94□□□□□ -1.94
ABCA3Q99758 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
ABCA3Q99758 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
ABCA3Q99758 FRG1BP-201ENST00000278882 761 ntBASIC2.93□□□□□ -1.94
ABCA3Q99758 Y_RNA.116-201ENST00000363292 103 ntBASIC2.93□□□□□ -1.94
ABCA3Q99758 CACYBPP1-201ENST00000438592 684 ntBASIC2.93□□□□□ -1.94
ABCA3Q99758 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.93□□□□□ -1.94
ABCA3Q99758 HSPE1P18-201ENST00000517602 280 ntBASIC2.93□□□□□ -1.94
ABCA3Q99758 AL135786.2-201ENST00000608422 615 ntBASIC2.93□□□□□ -1.94
ABCA3Q99758 XIST_intron.1-201ENST00000619444 68 ntBASIC2.93□□□□□ -1.94
ABCA3Q99758 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ABCA3Q99758 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.93□□□□□ -1.94
ABCA3Q99758 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
ABCA3Q99758 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
ABCA3Q99758 Y_RNA.540-201ENST00000384638 111 ntBASIC2.93□□□□□ -1.94
ABCA3Q99758 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.93□□□□□ -1.94
ABCA3Q99758 RPL7P31-201ENST00000450192 724 ntBASIC2.93□□□□□ -1.94
ABCA3Q99758 AC004263.1-201ENST00000479327 332 ntBASIC2.93□□□□□ -1.94
ABCA3Q99758 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC2.93□□□□□ -1.94
ABCA3Q99758 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.93□□□□□ -1.94
ABCA3Q99758 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.93□□□□□ -1.94
ABCA3Q99758 AP003467.2-201ENST00000520175 319 ntBASIC2.93□□□□□ -1.94
ABCA3Q99758 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.93□□□□□ -1.94
ABCA3Q99758 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.93□□□□□ -1.94
ABCA3Q99758 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
ABCA3Q99758 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
ABCA3Q99758 AL359715.4-201ENST00000606629 1436 ntBASIC2.92□□□□□ -1.94
ABCA3Q99758 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ABCA3Q99758 SNORA11.4-201ENST00000408823 129 ntBASIC2.92□□□□□ -1.94
ABCA3Q99758 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.92□□□□□ -1.94
ABCA3Q99758 AC099336.2-201ENST00000422457 254 ntBASIC2.92□□□□□ -1.94
ABCA3Q99758 AC012498.1-201ENST00000424037 437 ntBASIC2.92□□□□□ -1.94
ABCA3Q99758 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.92□□□□□ -1.94
ABCA3Q99758 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.92□□□□□ -1.94
ABCA3Q99758 RN7SL283P-201ENST00000489055 303 ntBASIC2.92□□□□□ -1.94
ABCA3Q99758 AC012170.1-201ENST00000495139 359 ntBASIC2.92□□□□□ -1.94
ABCA3Q99758 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.92□□□□□ -1.94
ABCA3Q99758 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.92□□□□□ -1.94
ABCA3Q99758 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.92□□□□□ -1.94
ABCA3Q99758 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ABCA3Q99758 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.92□□□□□ -1.94
ABCA3Q99758 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
ABCA3Q99758 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
ABCA3Q99758 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
ABCA3Q99758 SNORA25.6-201ENST00000364121 118 ntBASIC2.91□□□□□ -1.94
ABCA3Q99758 SNORA51.4-201ENST00000364993 124 ntBASIC2.91□□□□□ -1.94
ABCA3Q99758 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
ABCA3Q99758 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ABCA3Q99758 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.91□□□□□ -1.94
ABCA3Q99758 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.91□□□□□ -1.94
ABCA3Q99758 AC093151.1-201ENST00000427711 313 ntBASIC2.91□□□□□ -1.94
ABCA3Q99758 AC009969.1-201ENST00000438726 172 ntBASIC2.91□□□□□ -1.94
ABCA3Q99758 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.91□□□□□ -1.94
ABCA3Q99758 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.91□□□□□ -1.94
ABCA3Q99758 OR5D17P-201ENST00000531492 978 ntBASIC2.91□□□□□ -1.94
ABCA3Q99758 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC2.91□□□□□ -1.94
ABCA3Q99758 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.91□□□□□ -1.94
ABCA3Q99758 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.91□□□□□ -1.94
ABCA3Q99758 AL645944.1-201ENST00000603857 493 ntBASIC2.91□□□□□ -1.94
ABCA3Q99758 AC069234.5-201ENST00000611056 416 ntBASIC2.91□□□□□ -1.94
ABCA3Q99758 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.91□□□□□ -1.94
ABCA3Q99758 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
ABCA3Q99758 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.91□□□□□ -1.94
ABCA3Q99758 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
ABCA3Q99758 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms