Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AP006248.3-201ENST00000623580 594 ntBASIC2.96□□□□□ -1.94
CDX2Q99626 AC026634.1-201ENST00000634369 198 ntBASIC2.96□□□□□ -1.94
CDX2Q99626 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.96□□□□□ -1.94
CDX2Q99626 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
CDX2Q99626 AC007256.1-201ENST00000392253 2765 ntBASIC2.96□□□□□ -1.94
CDX2Q99626 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDX2Q99626 AL157700.1-201ENST00000561973 1432 ntBASIC2.95□□□□□ -1.94
CDX2Q99626 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CDX2Q99626 RNU6-792P-201ENST00000363490 107 ntBASIC2.95□□□□□ -1.94
CDX2Q99626 SNORD114-30-201ENST00000364448 72 ntBASIC2.95□□□□□ -1.94
CDX2Q99626 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDX2Q99626 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CDX2Q99626 MTATP6P19-201ENST00000413797 659 ntBASIC2.95□□□□□ -1.94
CDX2Q99626 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.95□□□□□ -1.94
CDX2Q99626 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.95□□□□□ -1.94
CDX2Q99626 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.95□□□□□ -1.94
CDX2Q99626 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.95□□□□□ -1.94
CDX2Q99626 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.95□□□□□ -1.94
CDX2Q99626 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.95□□□□□ -1.94
CDX2Q99626 AL162389.1-201ENST00000449233 177 ntBASIC2.95□□□□□ -1.94
CDX2Q99626 HMGB3P8-201ENST00000449709 577 ntBASIC2.95□□□□□ -1.94
CDX2Q99626 AL353718.1-201ENST00000451028 517 ntBASIC2.95□□□□□ -1.94
CDX2Q99626 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.95□□□□□ -1.94
CDX2Q99626 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.95□□□□□ -1.94
CDX2Q99626 RPL23AP14-201ENST00000468281 468 ntBASIC2.95□□□□□ -1.94
CDX2Q99626 RPL23AP11-201ENST00000475260 469 ntBASIC2.95□□□□□ -1.94
CDX2Q99626 TRBV8-2-201ENST00000475637 270 ntBASIC2.95□□□□□ -1.94
CDX2Q99626 RPL23AP70-201ENST00000483361 460 ntBASIC2.95□□□□□ -1.94
CDX2Q99626 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.95□□□□□ -1.94
CDX2Q99626 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC2.95□□□□□ -1.94
CDX2Q99626 PCBP2P3-201ENST00000509726 843 ntBASIC2.95□□□□□ -1.94
CDX2Q99626 RN7SKP219-201ENST00000516825 296 ntBASIC2.95□□□□□ -1.94
CDX2Q99626 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.95□□□□□ -1.94
CDX2Q99626 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.95□□□□□ -1.94
CDX2Q99626 AC139103.1-201ENST00000534696 1030 ntBASIC2.95□□□□□ -1.94
CDX2Q99626 AADACP1-206ENST00000561502 1193 ntBASIC2.95□□□□□ -1.94
CDX2Q99626 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC2.95□□□□□ -1.94
CDX2Q99626 AC010928.3-201ENST00000587712 541 ntBASIC2.95□□□□□ -1.94
CDX2Q99626 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.95□□□□□ -1.94
CDX2Q99626 AC090425.2-201ENST00000608818 501 ntBASIC2.95□□□□□ -1.94
CDX2Q99626 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.95□□□□□ -1.94
CDX2Q99626 SNORA50A-202ENST00000629536 136 ntBASIC2.95□□□□□ -1.94
CDX2Q99626 HPVC1-201ENST00000629899 1198 ntBASIC2.95□□□□□ -1.94
CDX2Q99626 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.95□□□□□ -1.94
CDX2Q99626 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CDX2Q99626 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDX2Q99626 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.95□□□□□ -1.94
CDX2Q99626 ZNF542P-204ENST00000482727 1305 ntBASIC2.94□□□□□ -1.94
CDX2Q99626 MFSD8-213ENST00000641134 1327 ntBASIC2.94□□□□□ -1.94
CDX2Q99626 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.94□□□□□ -1.94
CDX2Q99626 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.94□□□□□ -1.94
CDX2Q99626 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CDX2Q99626 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CDX2Q99626 AC108206.1-201ENST00000570186 4159 ntBASIC2.94□□□□□ -1.94
CDX2Q99626 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDX2Q99626 AL512646.1-201ENST00000269395 1077 ntBASIC2.94□□□□□ -1.94
CDX2Q99626 ENSAP3-201ENST00000312710 333 ntBASIC2.94□□□□□ -1.94
CDX2Q99626 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.94□□□□□ -1.94
CDX2Q99626 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CDX2Q99626 RNU6-356P-201ENST00000384140 107 ntBASIC2.94□□□□□ -1.94
CDX2Q99626 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.94□□□□□ -1.94
CDX2Q99626 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.94□□□□□ -1.94
CDX2Q99626 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CDX2Q99626 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.94□□□□□ -1.94
CDX2Q99626 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CDX2Q99626 OR2B8P-201ENST00000432841 938 ntBASIC2.94□□□□□ -1.94
CDX2Q99626 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CDX2Q99626 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.94□□□□□ -1.94
CDX2Q99626 AC004801.2-202ENST00000463559 283 ntBASIC2.94□□□□□ -1.94
CDX2Q99626 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.94□□□□□ -1.94
CDX2Q99626 HMGB3P15-201ENST00000507326 574 ntBASIC2.94□□□□□ -1.94
CDX2Q99626 TMEM248P1-201ENST00000510579 951 ntBASIC2.94□□□□□ -1.94
CDX2Q99626 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.94□□□□□ -1.94
CDX2Q99626 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.94□□□□□ -1.94
CDX2Q99626 IGHV3-76-201ENST00000522465 295 ntBASIC2.94□□□□□ -1.94
CDX2Q99626 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.94□□□□□ -1.94
CDX2Q99626 AC010198.2-201ENST00000550612 259 ntBASIC2.94□□□□□ -1.94
CDX2Q99626 YWHAZP1-201ENST00000556286 722 ntBASIC2.94□□□□□ -1.94
CDX2Q99626 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.94□□□□□ -1.94
CDX2Q99626 AC044913.1-201ENST00000557200 430 ntBASIC2.94□□□□□ -1.94
CDX2Q99626 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.94□□□□□ -1.94
CDX2Q99626 ZNF92P2-201ENST00000600543 1059 ntBASIC2.94□□□□□ -1.94
CDX2Q99626 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.94□□□□□ -1.94
CDX2Q99626 AC005156.1-201ENST00000613371 573 ntBASIC2.94□□□□□ -1.94
CDX2Q99626 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.94□□□□□ -1.94
CDX2Q99626 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.94□□□□□ -1.94
CDX2Q99626 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.94□□□□□ -1.94
CDX2Q99626 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CDX2Q99626 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDX2Q99626 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDX2Q99626 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.93□□□□□ -1.94
CDX2Q99626 ADAM3A-203ENST00000461344 2157 ntBASIC2.93□□□□□ -1.94
CDX2Q99626 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CDX2Q99626 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.93□□□□□ -1.94
CDX2Q99626 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CDX2Q99626 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDX2Q99626 RNA5SP295-201ENST00000362655 121 ntBASIC2.93□□□□□ -1.94
CDX2Q99626 Y_RNA.269-201ENST00000364685 89 ntBASIC2.93□□□□□ -1.94
CDX2Q99626 AL079342.1-201ENST00000401460 267 ntBASIC2.93□□□□□ -1.94
CDX2Q99626 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms