Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SNORA32.2-201ENST00000384049 122 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 Y_RNA.431-201ENST00000384086 102 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 Y_RNA.474-201ENST00000384341 102 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 AL162578.1-201ENST00000406202 378 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 Y_RNA.605-201ENST00000410577 105 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 Y_RNA.625-201ENST00000411256 107 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 RPL35AP12-201ENST00000425362 338 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 RPL21P110-201ENST00000433345 446 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 AC092013.1-201ENST00000438795 332 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 CALM1P1-201ENST00000442082 433 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 RPL7P12-201ENST00000446719 750 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 AL031584.1-201ENST00000447169 754 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 RPL26P28-201ENST00000451325 435 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 MTND4P17-201ENST00000470444 350 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 RNU6-583P-201ENST00000516012 92 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 RNU6-835P-201ENST00000516974 104 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 PSMA2P1-201ENST00000526365 646 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 AC018552.3-201ENST00000567416 561 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 MIR548Y-201ENST00000582739 110 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 AC008638.3-201ENST00000603341 463 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 AC245014.2-201ENST00000603689 287 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 BCRP9-201ENST00000605312 388 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 AC246785.4-201ENST00000605374 287 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 MIR98-201ENST00000606724 119 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 MIR8069-1-201ENST00000616627 86 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 AC009248.2-201ENST00000619826 254 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 MIR8069-2-201ENST00000621412 86 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 AC134503.1-201ENST00000633048 54 ntBASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.77□□□□□ -1.65
CDK5RAP1Q96SZ6 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 OR11H4-201ENST00000315409 1082 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 RNU6-463P-201ENST00000384340 107 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 MIR559-201ENST00000385188 96 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 AL592291.1-201ENST00000403830 352 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 AC016397.1-201ENST00000412463 242 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 AC113618.1-201ENST00000416747 285 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 CYCSP10-201ENST00000417973 294 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 EIF1P3-201ENST00000423841 334 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 AC133104.1-201ENST00000429100 218 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 RPS26P2-201ENST00000440331 348 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 CBWD4P-201ENST00000445695 655 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 TRGVB-201ENST00000453257 471 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 MTND5P16-201ENST00000460269 1703 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 RN7SL459P-201ENST00000481078 302 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 RPL36AP51-201ENST00000487216 318 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 OR51K1P-201ENST00000510214 950 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 RNA5SP401-201ENST00000515920 127 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 BTF3P12-201ENST00000519620 469 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 HIGD1AP5-201ENST00000529959 259 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 AC022882.1-201ENST00000532142 501 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 AP003034.1-201ENST00000534621 422 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 AP001180.3-201ENST00000582221 145 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 CKS1BP3-201ENST00000600888 237 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 AC068790.4-201ENST00000602474 263 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 AC006006.1-201ENST00000603082 144 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 AC008745.1-201ENST00000604064 271 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 AL356218.2-201ENST00000605264 187 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 AC090525.3-201ENST00000605601 189 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 AP004247.3-201ENST00000608682 624 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 AL158196.1-201ENST00000616786 434 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms