Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 RNU6-603P-201ENST00000411403 107 ntBASIC5.74□□□□□ -1.49
IFT43Q96FT9 GPS2P1-201ENST00000411761 986 ntBASIC5.74□□□□□ -1.49
IFT43Q96FT9 RPL7P10-201ENST00000417407 739 ntBASIC5.74□□□□□ -1.49
IFT43Q96FT9 AC099336.2-201ENST00000422457 254 ntBASIC5.74□□□□□ -1.49
IFT43Q96FT9 AL662874.1-201ENST00000426065 230 ntBASIC5.74□□□□□ -1.49
IFT43Q96FT9 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
IFT43Q96FT9 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC5.74□□□□□ -1.49
IFT43Q96FT9 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.74□□□□□ -1.49
IFT43Q96FT9 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.74□□□□□ -1.49
IFT43Q96FT9 RPS15AP27-201ENST00000449183 343 ntBASIC5.74□□□□□ -1.49
IFT43Q96FT9 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.74□□□□□ -1.49
IFT43Q96FT9 AL162388.1-201ENST00000450912 352 ntBASIC5.74□□□□□ -1.49
IFT43Q96FT9 AC099560.2-201ENST00000457554 255 ntBASIC5.74□□□□□ -1.49
IFT43Q96FT9 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
IFT43Q96FT9 RPS26P39-201ENST00000469206 341 ntBASIC5.74□□□□□ -1.49
IFT43Q96FT9 AC058823.1-201ENST00000485315 474 ntBASIC5.74□□□□□ -1.49
IFT43Q96FT9 RNU6-513P-201ENST00000516104 104 ntBASIC5.74□□□□□ -1.49
IFT43Q96FT9 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.74□□□□□ -1.49
IFT43Q96FT9 AC009812.2-201ENST00000517657 457 ntBASIC5.74□□□□□ -1.49
IFT43Q96FT9 NRBF2P4-201ENST00000520874 850 ntBASIC5.74□□□□□ -1.49
IFT43Q96FT9 HMGN1P28-201ENST00000521340 364 ntBASIC5.74□□□□□ -1.49
IFT43Q96FT9 IGKV2-18-201ENST00000522607 343 ntBASIC5.74□□□□□ -1.49
IFT43Q96FT9 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
IFT43Q96FT9 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.74□□□□□ -1.49
IFT43Q96FT9 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.74□□□□□ -1.49
IFT43Q96FT9 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.74□□□□□ -1.49
IFT43Q96FT9 AL049872.1-201ENST00000556323 322 ntBASIC5.74□□□□□ -1.49
IFT43Q96FT9 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.74□□□□□ -1.49
IFT43Q96FT9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.74□□□□□ -1.49
IFT43Q96FT9 AL355365.1-201ENST00000616480 294 ntBASIC5.74□□□□□ -1.49
IFT43Q96FT9 AC007485.1-201ENST00000616755 206 ntBASIC5.74□□□□□ -1.49
IFT43Q96FT9 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.74□□□□□ -1.49
IFT43Q96FT9 AL445363.3-201ENST00000623080 671 ntBASIC5.74□□□□□ -1.49
IFT43Q96FT9 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
IFT43Q96FT9 AC097063.1-201ENST00000426714 1797 ntBASIC5.74□□□□□ -1.49
IFT43Q96FT9 AL031119.1-201ENST00000404707 1879 ntBASIC5.74□□□□□ -1.49
IFT43Q96FT9 PNPT1P2-201ENST00000456768 2050 ntBASIC5.74□□□□□ -1.49
IFT43Q96FT9 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.74□□□□□ -1.49
IFT43Q96FT9 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
IFT43Q96FT9 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.74□□□□□ -1.49
IFT43Q96FT9 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
IFT43Q96FT9 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
IFT43Q96FT9 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.73□□□□□ -1.49
IFT43Q96FT9 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
IFT43Q96FT9 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
IFT43Q96FT9 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
IFT43Q96FT9 KPNA2P1-201ENST00000458289 1591 ntBASIC5.73□□□□□ -1.49
IFT43Q96FT9 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
IFT43Q96FT9 AC093849.1-201ENST00000563631 2209 ntBASIC5.73□□□□□ -1.49
IFT43Q96FT9 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
IFT43Q96FT9 SET-203ENST00000372688 801 ntTSL 2 BASIC5.73□□□□□ -1.49
IFT43Q96FT9 RNU6-1127P-201ENST00000384580 107 ntBASIC5.73□□□□□ -1.49
IFT43Q96FT9 Y_RNA.574-201ENST00000384766 95 ntBASIC5.73□□□□□ -1.49
IFT43Q96FT9 RNU6-754P-201ENST00000391166 107 ntBASIC5.73□□□□□ -1.49
IFT43Q96FT9 RNU2-50P-201ENST00000410494 143 ntBASIC5.73□□□□□ -1.49
IFT43Q96FT9 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.73□□□□□ -1.49
IFT43Q96FT9 RPS15AP40-201ENST00000419621 391 ntBASIC5.73□□□□□ -1.49
IFT43Q96FT9 BX510359.3-201ENST00000422168 306 ntBASIC5.73□□□□□ -1.49
IFT43Q96FT9 AC113412.1-201ENST00000425840 504 ntBASIC5.73□□□□□ -1.49
IFT43Q96FT9 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC5.73□□□□□ -1.49
IFT43Q96FT9 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.73□□□□□ -1.49
IFT43Q96FT9 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.73□□□□□ -1.49
IFT43Q96FT9 NRBF2P3-201ENST00000432731 865 ntBASIC5.73□□□□□ -1.49
IFT43Q96FT9 CEACAMP1-201ENST00000434624 1035 ntBASIC5.73□□□□□ -1.49
IFT43Q96FT9 RPL7P28-201ENST00000437739 740 ntBASIC5.73□□□□□ -1.49
IFT43Q96FT9 AL163193.1-201ENST00000444895 788 ntBASIC5.73□□□□□ -1.49
IFT43Q96FT9 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.73□□□□□ -1.49
IFT43Q96FT9 RPS23P6-201ENST00000466136 431 ntBASIC5.73□□□□□ -1.49
IFT43Q96FT9 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.73□□□□□ -1.49
IFT43Q96FT9 RPL23AP55-201ENST00000498163 452 ntBASIC5.73□□□□□ -1.49
IFT43Q96FT9 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.73□□□□□ -1.49
IFT43Q96FT9 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.73□□□□□ -1.49
IFT43Q96FT9 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.73□□□□□ -1.49
IFT43Q96FT9 DEFB108D-201ENST00000527787 222 ntBASIC5.73□□□□□ -1.49
IFT43Q96FT9 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.73□□□□□ -1.49
IFT43Q96FT9 AC137627.1-201ENST00000545761 289 ntBASIC5.73□□□□□ -1.49
IFT43Q96FT9 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.73□□□□□ -1.49
IFT43Q96FT9 SETP7-201ENST00000552169 453 ntBASIC5.73□□□□□ -1.49
IFT43Q96FT9 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.73□□□□□ -1.49
IFT43Q96FT9 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.73□□□□□ -1.49
IFT43Q96FT9 AC026470.2-201ENST00000561492 181 ntBASIC5.73□□□□□ -1.49
IFT43Q96FT9 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.73□□□□□ -1.49
IFT43Q96FT9 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.73□□□□□ -1.49
IFT43Q96FT9 SUMO2P15-201ENST00000604285 278 ntBASIC5.73□□□□□ -1.49
IFT43Q96FT9 AP001784.1-201ENST00000624107 428 ntBASIC5.73□□□□□ -1.49
IFT43Q96FT9 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.73□□□□□ -1.49
IFT43Q96FT9 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
IFT43Q96FT9 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.73□□□□□ -1.49
IFT43Q96FT9 THAP12P5-201ENST00000405864 2275 ntBASIC5.73□□□□□ -1.49
IFT43Q96FT9 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.73□□□□□ -1.49
IFT43Q96FT9 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.73□□□□□ -1.49
IFT43Q96FT9 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
IFT43Q96FT9 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
IFT43Q96FT9 AC009229.4-201ENST00000623854 1947 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.72□□□□□ -1.49
IFT43Q96FT9 OR55B1P-203ENST00000641518 2602 ntBASIC5.72□□□□□ -1.49
IFT43Q96FT9 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
IFT43Q96FT9 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
IFT43Q96FT9 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
IFT43Q96FT9 MTND5P30-201ENST00000452896 1731 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms