Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 MIR558-201ENST00000384920 94 ntBASIC5.74□□□□□ -1.49
TRIM11Q96F44 MT-TW-201ENST00000387382 68 ntBASIC5.74□□□□□ -1.49
TRIM11Q96F44 EIF4E2P1-201ENST00000393781 255 ntBASIC5.74□□□□□ -1.49
TRIM11Q96F44 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
TRIM11Q96F44 RPL21P1-201ENST00000399532 476 ntBASIC5.74□□□□□ -1.49
TRIM11Q96F44 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
TRIM11Q96F44 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM11Q96F44 RPS15AP10-201ENST00000432472 382 ntBASIC5.74□□□□□ -1.49
TRIM11Q96F44 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM11Q96F44 EEF1B2P6-201ENST00000445713 673 ntBASIC5.74□□□□□ -1.49
TRIM11Q96F44 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM11Q96F44 AC090804.1-201ENST00000448870 490 ntBASIC5.74□□□□□ -1.49
TRIM11Q96F44 NANOGP10-201ENST00000453325 895 ntBASIC5.74□□□□□ -1.49
TRIM11Q96F44 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM11Q96F44 RPL23AP71-201ENST00000470966 469 ntBASIC5.74□□□□□ -1.49
TRIM11Q96F44 AC092754.1-201ENST00000472975 479 ntBASIC5.74□□□□□ -1.49
TRIM11Q96F44 RPL7P51-201ENST00000490532 749 ntBASIC5.74□□□□□ -1.49
TRIM11Q96F44 AC090453.1-201ENST00000495560 436 ntBASIC5.74□□□□□ -1.49
TRIM11Q96F44 AC008526.1-201ENST00000509149 338 ntBASIC5.74□□□□□ -1.49
TRIM11Q96F44 SNORA81.3-201ENST00000517283 198 ntBASIC5.74□□□□□ -1.49
TRIM11Q96F44 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM11Q96F44 IGHV3-76-201ENST00000522465 295 ntBASIC5.74□□□□□ -1.49
TRIM11Q96F44 AC005363.1-201ENST00000530779 351 ntBASIC5.74□□□□□ -1.49
TRIM11Q96F44 OR5D17P-201ENST00000531492 978 ntBASIC5.74□□□□□ -1.49
TRIM11Q96F44 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM11Q96F44 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM11Q96F44 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM11Q96F44 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM11Q96F44 AL353997.4-201ENST00000586196 166 ntBASIC5.74□□□□□ -1.49
TRIM11Q96F44 AP000769.2-201ENST00000602344 396 ntBASIC5.74□□□□□ -1.49
TRIM11Q96F44 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM11Q96F44 AL627230.1-201ENST00000613077 211 ntBASIC5.74□□□□□ -1.49
TRIM11Q96F44 MIR7973-1-201ENST00000614683 76 ntBASIC5.74□□□□□ -1.49
TRIM11Q96F44 uc_338.12-201ENST00000616344 181 ntBASIC5.74□□□□□ -1.49
TRIM11Q96F44 CU639417.4-201ENST00000623928 207 ntBASIC5.74□□□□□ -1.49
TRIM11Q96F44 AL359854.1-201ENST00000614203 1594 ntBASIC5.74□□□□□ -1.49
TRIM11Q96F44 AC093775.1-201ENST00000624154 1868 ntBASIC5.74□□□□□ -1.49
TRIM11Q96F44 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
TRIM11Q96F44 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM11Q96F44 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM11Q96F44 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
TRIM11Q96F44 OR55B1P-203ENST00000641518 2602 ntBASIC5.74□□□□□ -1.49
TRIM11Q96F44 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM11Q96F44 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM11Q96F44 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.74□□□□□ -1.49
TRIM11Q96F44 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM11Q96F44 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM11Q96F44 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
TRIM11Q96F44 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM11Q96F44 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
TRIM11Q96F44 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM11Q96F44 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM11Q96F44 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
TRIM11Q96F44 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM11Q96F44 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM11Q96F44 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM11Q96F44 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
TRIM11Q96F44 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM11Q96F44 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM11Q96F44 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM11Q96F44 RNU4-44P-201ENST00000363050 141 ntBASIC5.73□□□□□ -1.49
TRIM11Q96F44 U3.7-201ENST00000363668 216 ntBASIC5.73□□□□□ -1.49
TRIM11Q96F44 OR1L6-202ENST00000373684 1044 ntBASIC5.73□□□□□ -1.49
TRIM11Q96F44 Y_RNA.477-201ENST00000384352 108 ntBASIC5.73□□□□□ -1.49
TRIM11Q96F44 Y_RNA.478-201ENST00000384358 107 ntBASIC5.73□□□□□ -1.49
TRIM11Q96F44 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM11Q96F44 AC243428.1-201ENST00000421099 264 ntBASIC5.73□□□□□ -1.49
TRIM11Q96F44 AC012065.2-201ENST00000421295 375 ntBASIC5.73□□□□□ -1.49
TRIM11Q96F44 RPS3P2-201ENST00000421346 701 ntBASIC5.73□□□□□ -1.49
TRIM11Q96F44 HMGN2P27-201ENST00000427352 270 ntBASIC5.73□□□□□ -1.49
TRIM11Q96F44 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM11Q96F44 RPS24P8-201ENST00000431490 402 ntBASIC5.73□□□□□ -1.49
TRIM11Q96F44 MTATP6P16-201ENST00000434543 526 ntBASIC5.73□□□□□ -1.49
TRIM11Q96F44 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM11Q96F44 AC092013.1-201ENST00000438795 332 ntBASIC5.73□□□□□ -1.49
TRIM11Q96F44 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM11Q96F44 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM11Q96F44 MTND4LP30-201ENST00000454092 297 ntBASIC5.73□□□□□ -1.49
TRIM11Q96F44 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM11Q96F44 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
TRIM11Q96F44 AC004801.2-202ENST00000463559 283 ntBASIC5.73□□□□□ -1.49
TRIM11Q96F44 RPL7P6-201ENST00000480903 738 ntBASIC5.73□□□□□ -1.49
TRIM11Q96F44 AC116337.1-201ENST00000509680 687 ntBASIC5.73□□□□□ -1.49
TRIM11Q96F44 RNA5SP503-201ENST00000517047 117 ntBASIC5.73□□□□□ -1.49
TRIM11Q96F44 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM11Q96F44 AC022080.3-201ENST00000544433 482 ntBASIC5.73□□□□□ -1.49
TRIM11Q96F44 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM11Q96F44 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM11Q96F44 IGHV3-29-201ENST00000604817 344 ntBASIC5.73□□□□□ -1.49
TRIM11Q96F44 AC009229.3-201ENST00000608056 282 ntBASIC5.73□□□□□ -1.49
TRIM11Q96F44 AL355365.1-201ENST00000616480 294 ntBASIC5.73□□□□□ -1.49
TRIM11Q96F44 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM11Q96F44 AC103858.2-201ENST00000621471 543 ntBASIC5.73□□□□□ -1.49
TRIM11Q96F44 AP001005.3-201ENST00000622049 129 ntBASIC5.73□□□□□ -1.49
TRIM11Q96F44 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM11Q96F44 U6.104-201ENST00000637979 90 ntBASIC5.73□□□□□ -1.49
TRIM11Q96F44 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM11Q96F44 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
TRIM11Q96F44 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM11Q96F44 MUC2-202ENST00000613187 4845 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms