Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC8.89□□□□□ -0.99
TRIM41Q8WV44 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC8.89□□□□□ -0.99
TRIM41Q8WV44 MIR3944-201ENST00000581277 108 ntBASIC8.89□□□□□ -0.99
TRIM41Q8WV44 MIR4424-201ENST00000585257 86 ntBASIC8.89□□□□□ -0.99
TRIM41Q8WV44 AL353997.4-201ENST00000586196 166 ntBASIC8.89□□□□□ -0.99
TRIM41Q8WV44 RNU6-84P-201ENST00000607737 102 ntBASIC8.89□□□□□ -0.99
TRIM41Q8WV44 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC8.89□□□□□ -0.99
TRIM41Q8WV44 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TRIM41Q8WV44 ST7-221ENST00000465133 2155 ntTSL 5 BASIC8.89□□□□□ -0.99
TRIM41Q8WV44 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC8.89□□□□□ -0.99
TRIM41Q8WV44 API5P2-201ENST00000397055 1498 ntBASIC8.89□□□□□ -0.99
TRIM41Q8WV44 AL360270.2-201ENST00000562952 5985 ntBASIC8.89□□□□□ -0.99
TRIM41Q8WV44 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC8.88□□□□□ -0.99
TRIM41Q8WV44 MFF-206ENST00000392059 1710 ntTSL 5 BASIC8.88□□□□□ -0.99
TRIM41Q8WV44 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
TRIM41Q8WV44 CASC19-284ENST00000642142 1868 ntBASIC8.88□□□□□ -0.99
TRIM41Q8WV44 Y_RNA.153-201ENST00000363615 91 ntBASIC8.88□□□□□ -0.99
TRIM41Q8WV44 RNA5SP455-201ENST00000365190 119 ntBASIC8.88□□□□□ -0.99
TRIM41Q8WV44 RNU6-1029P-201ENST00000384109 107 ntBASIC8.88□□□□□ -0.99
TRIM41Q8WV44 RNU6-921P-201ENST00000384361 107 ntBASIC8.88□□□□□ -0.99
TRIM41Q8WV44 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TRIM41Q8WV44 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC8.88□□□□□ -0.99
TRIM41Q8WV44 AC008267.5-201ENST00000424928 265 ntBASIC8.88□□□□□ -0.99
TRIM41Q8WV44 PCNPP5-201ENST00000452246 481 ntBASIC8.88□□□□□ -0.99
TRIM41Q8WV44 SNRPFP3-201ENST00000457792 225 ntBASIC8.88□□□□□ -0.99
TRIM41Q8WV44 RNU7-180P-201ENST00000459240 63 ntBASIC8.88□□□□□ -0.99
TRIM41Q8WV44 RPL7P43-201ENST00000478876 753 ntBASIC8.88□□□□□ -0.99
TRIM41Q8WV44 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
TRIM41Q8WV44 TXNP6-201ENST00000510190 310 ntBASIC8.88□□□□□ -0.99
TRIM41Q8WV44 RNU6-1143P-201ENST00000516125 104 ntBASIC8.88□□□□□ -0.99
TRIM41Q8WV44 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
TRIM41Q8WV44 AC109635.4-202ENST00000531666 412 ntBASIC8.88□□□□□ -0.99
TRIM41Q8WV44 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC8.88□□□□□ -0.99
TRIM41Q8WV44 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
TRIM41Q8WV44 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC8.88□□□□□ -0.99
TRIM41Q8WV44 LSM3P2-201ENST00000551246 273 ntBASIC8.88□□□□□ -0.99
TRIM41Q8WV44 AC008814.1-201ENST00000603797 406 ntBASIC8.88□□□□□ -0.99
TRIM41Q8WV44 AL031666.3-201ENST00000609320 1006 ntBASIC8.88□□□□□ -0.99
TRIM41Q8WV44 Z82243.1-201ENST00000609432 473 ntBASIC8.88□□□□□ -0.99
TRIM41Q8WV44 ZYXP1-201ENST00000617638 118 ntBASIC8.88□□□□□ -0.99
TRIM41Q8WV44 AL159972.1-201ENST00000625150 448 ntBASIC8.88□□□□□ -0.99
TRIM41Q8WV44 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC8.88□□□□□ -0.99
TRIM41Q8WV44 RMST-202ENST00000541282 2099 ntTSL 2 BASIC8.88□□□□□ -0.99
TRIM41Q8WV44 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TRIM41Q8WV44 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
TRIM41Q8WV44 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
TRIM41Q8WV44 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
TRIM41Q8WV44 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TRIM41Q8WV44 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
TRIM41Q8WV44 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC8.87□□□□□ -0.99
TRIM41Q8WV44 Y_RNA.111-201ENST00000363248 100 ntBASIC8.87□□□□□ -0.99
TRIM41Q8WV44 SNORA62.3-201ENST00000365110 153 ntBASIC8.87□□□□□ -0.99
TRIM41Q8WV44 SNORA75B-201ENST00000384053 137 ntBASIC8.87□□□□□ -0.99
TRIM41Q8WV44 RNY1P14-201ENST00000384426 108 ntBASIC8.87□□□□□ -0.99
TRIM41Q8WV44 VDAC1P9-201ENST00000412766 841 ntBASIC8.87□□□□□ -0.99
TRIM41Q8WV44 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC8.87□□□□□ -0.99
TRIM41Q8WV44 AC048351.1-201ENST00000420064 602 ntBASIC8.87□□□□□ -0.99
TRIM41Q8WV44 SKA2P1-201ENST00000425592 390 ntBASIC8.87□□□□□ -0.99
TRIM41Q8WV44 NRBF2P3-201ENST00000432731 865 ntBASIC8.87□□□□□ -0.99
TRIM41Q8WV44 NOP56P2-201ENST00000447491 769 ntBASIC8.87□□□□□ -0.99
TRIM41Q8WV44 HMGB1P15-201ENST00000453854 435 ntBASIC8.87□□□□□ -0.99
TRIM41Q8WV44 HMGB1P4-201ENST00000455362 567 ntBASIC8.87□□□□□ -0.99
TRIM41Q8WV44 AC004801.2-202ENST00000463559 283 ntBASIC8.87□□□□□ -0.99
TRIM41Q8WV44 RN7SL197P-201ENST00000466981 299 ntBASIC8.87□□□□□ -0.99
TRIM41Q8WV44 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC8.87□□□□□ -0.99
TRIM41Q8WV44 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC8.87□□□□□ -0.99
TRIM41Q8WV44 AC087854.1-201ENST00000519706 414 ntBASIC8.87□□□□□ -0.99
TRIM41Q8WV44 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC8.87□□□□□ -0.99
TRIM41Q8WV44 AC023442.1-201ENST00000531247 422 ntBASIC8.87□□□□□ -0.99
TRIM41Q8WV44 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC8.87□□□□□ -0.99
TRIM41Q8WV44 AC068993.1-201ENST00000546724 589 ntBASIC8.87□□□□□ -0.99
TRIM41Q8WV44 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC8.87□□□□□ -0.99
TRIM41Q8WV44 AC113195.1-201ENST00000579952 141 ntBASIC8.87□□□□□ -0.99
TRIM41Q8WV44 AC060771.1-201ENST00000582031 164 ntBASIC8.87□□□□□ -0.99
TRIM41Q8WV44 AC018889.1-201ENST00000605372 397 ntBASIC8.87□□□□□ -0.99
TRIM41Q8WV44 AC010632.3-201ENST00000611377 369 ntBASIC8.87□□□□□ -0.99
TRIM41Q8WV44 U2.22-201ENST00000636441 106 ntBASIC8.87□□□□□ -0.99
TRIM41Q8WV44 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC8.87□□□□□ -0.99
TRIM41Q8WV44 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TRIM41Q8WV44 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TRIM41Q8WV44 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TRIM41Q8WV44 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
TRIM41Q8WV44 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TRIM41Q8WV44 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC8.87□□□□□ -0.99
TRIM41Q8WV44 BCORP1-203ENST00000513194 5093 ntBASIC8.87□□□□□ -0.99
TRIM41Q8WV44 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 MTND5P30-201ENST00000452896 1731 ntBASIC8.86□□□□□ -0.99
TRIM41Q8WV44 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 HSPE1P11-201ENST00000339579 310 ntBASIC8.86□□□□□ -0.99
TRIM41Q8WV44 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 RNU6-890P-201ENST00000384121 107 ntBASIC8.86□□□□□ -0.99
TRIM41Q8WV44 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 AL078604.1-201ENST00000404609 466 ntBASIC8.86□□□□□ -0.99
TRIM41Q8WV44 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 RPL21P23-201ENST00000446654 460 ntBASIC8.86□□□□□ -0.99
TRIM41Q8WV44 RBMY2TP-201ENST00000451162 947 ntBASIC8.86□□□□□ -0.99
TRIM41Q8WV44 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 PRSS3P4-201ENST00000453323 162 ntBASIC8.86□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms