Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 AC108120.2-201ENST00000512973 294 ntBASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 AC233266.2-201ENST00000567067 528 ntBASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 AC011374.2-201ENST00000607135 526 ntBASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 AC010329.2-201ENST00000595195 2737 ntBASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 DYNLT3P1-201ENST00000378574 347 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 TAF9BP2-201ENST00000400856 499 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 NCSTNP1-201ENST00000406229 144 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 SNORD88.1-201ENST00000408684 91 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 ARF4P2-201ENST00000430209 526 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 YWHAZP7-201ENST00000436906 631 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 AP000949.1-201ENST00000438328 629 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 CALM1P2-201ENST00000452941 448 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 IFNWP4-201ENST00000453148 294 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 RPL31P13-201ENST00000484151 370 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 AC025459.1-201ENST00000504072 156 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 AC008549.1-201ENST00000512900 643 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 CIR1P1-201ENST00000524055 1133 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 AC004923.2-201ENST00000529649 369 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 OR5D17P-201ENST00000531492 978 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 OSBPL9P3-201ENST00000534523 595 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 AC092451.2-201ENST00000538746 658 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 OR11H5P-201ENST00000554039 926 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 AC015712.3-201ENST00000559380 164 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 ZNF72P-201ENST00000425869 1908 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 AL512283.1-201ENST00000606756 1384 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 MIR142-201ENST00000384835 87 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 AL450338.1-201ENST00000407987 512 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 Y_RNA.595-201ENST00000410403 105 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 AC080125.1-201ENST00000414888 684 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 AL137014.1-201ENST00000420490 1226 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 AC025768.1-201ENST00000510057 267 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 NDUFB4P9-201ENST00000511646 388 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 AC103710.3-201ENST00000608157 948 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 AC135803.1-201ENST00000608748 565 ntBASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.61□□□□□ -1.99
SHROOM3Q8TF72 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 RNU6-252P-201ENST00000363232 107 ntBASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 Y_RNA.164-201ENST00000363709 102 ntBASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 RNA5SP498-201ENST00000411342 120 ntBASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 RPS4XP6-201ENST00000477670 797 ntBASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 AC010468.3-201ENST00000508225 458 ntBASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 AC008716.1-201ENST00000511084 513 ntBASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 AC007536.1-201ENST00000533382 349 ntBASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 OR7K1P-201ENST00000546439 926 ntBASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 NOP56P3-201ENST00000549457 385 ntBASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 AC006116.7-201ENST00000590141 756 ntBASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 AC008277.2-201ENST00000605196 797 ntBASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 AC135178.6-201ENST00000605314 398 ntBASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 AC010680.4-201ENST00000605334 543 ntBASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 AC090617.9-201ENST00000623751 147 ntBASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 AP003400.6-201ENST00000624698 740 ntBASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 AC099063.3-201ENST00000642066 185 ntBASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 CUL1P1-201ENST00000509510 2425 ntBASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 AL161781.1-201ENST00000354277 403 ntBASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 AL031736.2-201ENST00000426573 787 ntBASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 RPS27P27-201ENST00000498779 255 ntBASIC2.6□□□□□ -1.99
SHROOM3Q8TF72 AC093770.1-201ENST00000511559 571 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms