Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC89Q8N998 Z74696.2-201ENST00000436514 498 ntBASIC3.9□□□□□ -1.79
CCDC89Q8N998 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC89Q8N998 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC89Q8N998 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC89Q8N998 SNORD121B-201ENST00000458838 81 ntBASIC3.9□□□□□ -1.79
CCDC89Q8N998 RPS7P7-201ENST00000463499 571 ntBASIC3.9□□□□□ -1.79
CCDC89Q8N998 RPL21P8-201ENST00000465083 535 ntBASIC3.9□□□□□ -1.79
CCDC89Q8N998 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC89Q8N998 MTND4LP22-201ENST00000508209 276 ntBASIC3.9□□□□□ -1.79
CCDC89Q8N998 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC89Q8N998 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC89Q8N998 AC008489.1-201ENST00000524271 483 ntBASIC3.9□□□□□ -1.79
CCDC89Q8N998 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC89Q8N998 AC025884.1-201ENST00000556034 378 ntBASIC3.9□□□□□ -1.79
CCDC89Q8N998 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC89Q8N998 AL031985.2-201ENST00000600955 480 ntBASIC3.9□□□□□ -1.79
CCDC89Q8N998 AC015726.1-201ENST00000602353 681 ntBASIC3.9□□□□□ -1.79
CCDC89Q8N998 MIR6500-201ENST00000622700 86 ntBASIC3.9□□□□□ -1.79
CCDC89Q8N998 AC090772.4-201ENST00000623599 362 ntBASIC3.9□□□□□ -1.79
CCDC89Q8N998 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC89Q8N998 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC89Q8N998 MIR492-201ENST00000638676 116 ntBASIC3.9□□□□□ -1.79
CCDC89Q8N998 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC89Q8N998 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
CCDC89Q8N998 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
CCDC89Q8N998 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC89Q8N998 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC89Q8N998 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CCDC89Q8N998 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CCDC89Q8N998 RNU6-97P-201ENST00000363387 104 ntBASIC3.89□□□□□ -1.79
CCDC89Q8N998 RNU6-343P-201ENST00000364709 104 ntBASIC3.89□□□□□ -1.79
CCDC89Q8N998 SNORA70C-201ENST00000384538 135 ntBASIC3.89□□□□□ -1.79
CCDC89Q8N998 RNU6-636P-201ENST00000384598 107 ntBASIC3.89□□□□□ -1.79
CCDC89Q8N998 RNU6-1197P-201ENST00000391183 107 ntBASIC3.89□□□□□ -1.79
CCDC89Q8N998 SNORA48.8-201ENST00000391324 134 ntBASIC3.89□□□□□ -1.79
CCDC89Q8N998 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC89Q8N998 USP9YP33-201ENST00000412220 421 ntBASIC3.89□□□□□ -1.79
CCDC89Q8N998 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC89Q8N998 MTCYBP38-201ENST00000417160 1123 ntBASIC3.89□□□□□ -1.79
CCDC89Q8N998 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC89Q8N998 USP9YP35-201ENST00000435696 412 ntBASIC3.89□□□□□ -1.79
CCDC89Q8N998 AC090774.1-201ENST00000435925 246 ntBASIC3.89□□□□□ -1.79
CCDC89Q8N998 SNRPEP7-201ENST00000438350 220 ntBASIC3.89□□□□□ -1.79
CCDC89Q8N998 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.89□□□□□ -1.79
CCDC89Q8N998 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC89Q8N998 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC89Q8N998 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC89Q8N998 RPL7P19-201ENST00000469948 618 ntBASIC3.89□□□□□ -1.79
CCDC89Q8N998 AC111000.2-201ENST00000507775 550 ntBASIC3.89□□□□□ -1.79
CCDC89Q8N998 AC026801.2-201ENST00000515352 425 ntBASIC3.89□□□□□ -1.79
CCDC89Q8N998 AC022695.1-201ENST00000522089 237 ntBASIC3.89□□□□□ -1.79
CCDC89Q8N998 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC89Q8N998 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC89Q8N998 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC89Q8N998 AC006960.3-201ENST00000561845 705 ntBASIC3.89□□□□□ -1.79
CCDC89Q8N998 KLKP1-201ENST00000595979 403 ntBASIC3.89□□□□□ -1.79
CCDC89Q8N998 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC89Q8N998 AL591034.3-201ENST00000605511 685 ntBASIC3.89□□□□□ -1.79
CCDC89Q8N998 AL158211.4-201ENST00000606988 584 ntBASIC3.89□□□□□ -1.79
CCDC89Q8N998 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC89Q8N998 AC092653.1-201ENST00000608509 531 ntBASIC3.89□□□□□ -1.79
CCDC89Q8N998 AC103798.2-201ENST00000624292 632 ntBASIC3.89□□□□□ -1.79
CCDC89Q8N998 SNORA50A-202ENST00000629536 136 ntBASIC3.89□□□□□ -1.79
CCDC89Q8N998 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC89Q8N998 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
CCDC89Q8N998 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
CCDC89Q8N998 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC89Q8N998 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CCDC89Q8N998 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC89Q8N998 AC103988.1-201ENST00000566382 2177 ntBASIC3.88□□□□□ -1.79
CCDC89Q8N998 MAPK10-362ENST00000641864 4484 ntBASIC3.88□□□□□ -1.79
CCDC89Q8N998 AL121657.1-201ENST00000327215 531 ntBASIC3.88□□□□□ -1.79
CCDC89Q8N998 RNU5A-1-201ENST00000362698 116 ntBASIC3.88□□□□□ -1.79
CCDC89Q8N998 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CCDC89Q8N998 AL049693.1-201ENST00000402760 611 ntBASIC3.88□□□□□ -1.79
CCDC89Q8N998 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC89Q8N998 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC89Q8N998 RPL30P2-201ENST00000414021 291 ntBASIC3.88□□□□□ -1.79
CCDC89Q8N998 MTCO2P23-201ENST00000425216 680 ntBASIC3.88□□□□□ -1.79
CCDC89Q8N998 AC234781.2-201ENST00000426370 994 ntBASIC3.88□□□□□ -1.79
CCDC89Q8N998 AL356867.1-201ENST00000429623 299 ntBASIC3.88□□□□□ -1.79
CCDC89Q8N998 ZYG11AP1-201ENST00000430329 837 ntBASIC3.88□□□□□ -1.79
CCDC89Q8N998 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC89Q8N998 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC89Q8N998 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC89Q8N998 USP9YP10-201ENST00000454868 628 ntBASIC3.88□□□□□ -1.79
CCDC89Q8N998 DUXAP8-207ENST00000456786 622 ntBASIC3.88□□□□□ -1.79
CCDC89Q8N998 UBDP1-202ENST00000457888 382 ntBASIC3.88□□□□□ -1.79
CCDC89Q8N998 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC89Q8N998 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC89Q8N998 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC89Q8N998 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC89Q8N998 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC89Q8N998 SCARNA1-201ENST00000517138 166 ntBASIC3.88□□□□□ -1.79
CCDC89Q8N998 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC89Q8N998 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC89Q8N998 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC89Q8N998 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC89Q8N998 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms