Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SIX5Q8N196 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SIX5Q8N196 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.88□□□□□ -1.47
SIX5Q8N196 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SIX5Q8N196 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SIX5Q8N196 Y_RNA.47-201ENST00000362697 108 ntBASIC5.88□□□□□ -1.47
SIX5Q8N196 Y_RNA.176-201ENST00000363815 109 ntBASIC5.88□□□□□ -1.47
SIX5Q8N196 Y_RNA.193-201ENST00000363979 102 ntBASIC5.88□□□□□ -1.47
SIX5Q8N196 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SIX5Q8N196 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SIX5Q8N196 Y_RNA.399-201ENST00000383955 105 ntBASIC5.88□□□□□ -1.47
SIX5Q8N196 RNU6-701P-201ENST00000384059 107 ntBASIC5.88□□□□□ -1.47
SIX5Q8N196 Y_RNA.527-201ENST00000384573 102 ntBASIC5.88□□□□□ -1.47
SIX5Q8N196 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.88□□□□□ -1.47
SIX5Q8N196 AL583834.1-201ENST00000406943 343 ntBASIC5.88□□□□□ -1.47
SIX5Q8N196 CYCSP10-201ENST00000417973 294 ntBASIC5.88□□□□□ -1.47
SIX5Q8N196 RPL21P109-201ENST00000422213 475 ntBASIC5.88□□□□□ -1.47
SIX5Q8N196 NUP35P1-201ENST00000422734 947 ntBASIC5.88□□□□□ -1.47
SIX5Q8N196 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.88□□□□□ -1.47
SIX5Q8N196 AC096644.2-201ENST00000429278 159 ntBASIC5.88□□□□□ -1.47
SIX5Q8N196 RPL12P18-201ENST00000437175 325 ntBASIC5.88□□□□□ -1.47
SIX5Q8N196 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.88□□□□□ -1.47
SIX5Q8N196 AL450023.1-201ENST00000450868 751 ntBASIC5.88□□□□□ -1.47
SIX5Q8N196 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.88□□□□□ -1.47
SIX5Q8N196 RPL23AP40-201ENST00000487630 390 ntBASIC5.88□□□□□ -1.47
SIX5Q8N196 RNU6-390P-201ENST00000516259 103 ntBASIC5.88□□□□□ -1.47
SIX5Q8N196 RNU6-1332P-201ENST00000516666 104 ntBASIC5.88□□□□□ -1.47
SIX5Q8N196 AC022790.1-201ENST00000522872 204 ntBASIC5.88□□□□□ -1.47
SIX5Q8N196 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.88□□□□□ -1.47
SIX5Q8N196 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.88□□□□□ -1.47
SIX5Q8N196 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.88□□□□□ -1.47
SIX5Q8N196 TVP23CP2-201ENST00000571473 623 ntBASIC5.88□□□□□ -1.47
SIX5Q8N196 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.88□□□□□ -1.47
SIX5Q8N196 MIR4716-201ENST00000579628 84 ntBASIC5.88□□□□□ -1.47
SIX5Q8N196 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.88□□□□□ -1.47
SIX5Q8N196 MIR5692C1-201ENST00000585309 91 ntBASIC5.88□□□□□ -1.47
SIX5Q8N196 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.88□□□□□ -1.47
SIX5Q8N196 AC009229.3-201ENST00000608056 282 ntBASIC5.88□□□□□ -1.47
SIX5Q8N196 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.88□□□□□ -1.47
SIX5Q8N196 FAM157A-202ENST00000615155 405 ntBASIC5.88□□□□□ -1.47
SIX5Q8N196 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.88□□□□□ -1.47
SIX5Q8N196 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.88□□□□□ -1.47
SIX5Q8N196 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.88□□□□□ -1.47
SIX5Q8N196 AC022164.1-201ENST00000568767 2673 ntBASIC5.88□□□□□ -1.47
SIX5Q8N196 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SIX5Q8N196 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SIX5Q8N196 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SIX5Q8N196 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SIX5Q8N196 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
SIX5Q8N196 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SIX5Q8N196 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SIX5Q8N196 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SIX5Q8N196 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.87□□□□□ -1.47
SIX5Q8N196 Y_RNA.252-201ENST00000364556 101 ntBASIC5.87□□□□□ -1.47
SIX5Q8N196 Y_RNA.463-201ENST00000384271 102 ntBASIC5.87□□□□□ -1.47
SIX5Q8N196 SNORA16.2-201ENST00000390991 127 ntBASIC5.87□□□□□ -1.47
SIX5Q8N196 CYB5AP4-201ENST00000396692 399 ntBASIC5.87□□□□□ -1.47
SIX5Q8N196 NDUFS5P1-201ENST00000405668 289 ntBASIC5.87□□□□□ -1.47
SIX5Q8N196 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.87□□□□□ -1.47
SIX5Q8N196 RPL12P34-201ENST00000424532 479 ntBASIC5.87□□□□□ -1.47
SIX5Q8N196 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.87□□□□□ -1.47
SIX5Q8N196 RPL23AP69-201ENST00000431134 458 ntBASIC5.87□□□□□ -1.47
SIX5Q8N196 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.87□□□□□ -1.47
SIX5Q8N196 AL353597.2-202ENST00000434901 373 ntBASIC5.87□□□□□ -1.47
SIX5Q8N196 AL663074.2-201ENST00000440621 479 ntBASIC5.87□□□□□ -1.47
SIX5Q8N196 AC090602.1-201ENST00000469695 252 ntBASIC5.87□□□□□ -1.47
SIX5Q8N196 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SIX5Q8N196 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.87□□□□□ -1.47
SIX5Q8N196 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.87□□□□□ -1.47
SIX5Q8N196 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SIX5Q8N196 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SIX5Q8N196 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
SIX5Q8N196 DYNLL1P4-201ENST00000549314 266 ntBASIC5.87□□□□□ -1.47
SIX5Q8N196 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.87□□□□□ -1.47
SIX5Q8N196 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.87□□□□□ -1.47
SIX5Q8N196 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.87□□□□□ -1.47
SIX5Q8N196 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SIX5Q8N196 OR1F2P-201ENST00000570470 933 ntBASIC5.87□□□□□ -1.47
SIX5Q8N196 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.87□□□□□ -1.47
SIX5Q8N196 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.87□□□□□ -1.47
SIX5Q8N196 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.87□□□□□ -1.47
SIX5Q8N196 AL034351.1-201ENST00000605288 668 ntBASIC5.87□□□□□ -1.47
SIX5Q8N196 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.87□□□□□ -1.47
SIX5Q8N196 AC011373.1-201ENST00000607270 237 ntBASIC5.87□□□□□ -1.47
SIX5Q8N196 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.87□□□□□ -1.47
SIX5Q8N196 PABPC1P7-201ENST00000413177 1513 ntBASIC5.87□□□□□ -1.47
SIX5Q8N196 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SIX5Q8N196 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
SIX5Q8N196 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SIX5Q8N196 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
SIX5Q8N196 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
SIX5Q8N196 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SIX5Q8N196 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SIX5Q8N196 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SIX5Q8N196 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SIX5Q8N196 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SIX5Q8N196 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
SIX5Q8N196 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SIX5Q8N196 MTND5P30-201ENST00000452896 1731 ntBASIC5.86□□□□□ -1.47
SIX5Q8N196 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms