Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 Z83843.1-201ENST00000604070 3685 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 MIR30E-201ENST00000362104 92 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 MIR208A-201ENST00000362287 71 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 RNU1-70P-201ENST00000362618 164 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 RNU6-263P-201ENST00000363811 107 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 SNORD82-201ENST00000365530 70 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 ANAPC10P1-201ENST00000395991 556 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 ARF4P3-201ENST00000397387 509 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 EIF5P1-201ENST00000400019 1231 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 MTND4LP20-201ENST00000402379 270 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 AL450338.1-201ENST00000407987 512 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 AL158156.1-201ENST00000422509 473 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 AC005326.1-201ENST00000429197 123 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 AC084290.1-201ENST00000434995 374 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 AC127537.2-201ENST00000439258 465 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 TXNP1-201ENST00000441872 371 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 HMGN2P21-201ENST00000447764 270 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 MRPS31P2-201ENST00000451581 518 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 RPL12P26-201ENST00000452430 487 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 HMGB3P30-201ENST00000457863 606 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 RN7SL601P-201ENST00000471221 293 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 AP002884.2-201ENST00000471647 395 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 AL358832.1-201ENST00000497800 389 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 AC021678.1-201ENST00000505195 936 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 RNU6-311P-201ENST00000516224 102 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 AC125611.1-201ENST00000549563 229 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 AC090695.1-201ENST00000561269 1222 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 AL669831.4-202ENST00000590817 238 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 IGHV3-29-201ENST00000604817 344 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 AL356321.1-201ENST00000621360 228 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 AC092326.2-201ENST00000624772 1561 ntBASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
C9orf40Q8IXQ3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 AL133383.2-201ENST00000622958 2336 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 SNRPEP3-201ENST00000338402 276 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 RNU6-761P-201ENST00000384148 107 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 Y_RNA.465-201ENST00000384293 102 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 PTMAP5-201ENST00000393073 333 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 SNRPEP2-201ENST00000397592 279 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 SKINT1L-201ENST00000401057 817 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 RNA5SP56-201ENST00000410277 118 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 HMGN1P24-201ENST00000412282 298 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 FNDC3CP-201ENST00000420795 1155 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 ATP5C1P1-201ENST00000441945 895 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 MTCYBP11-201ENST00000447254 1109 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 RPS20P32-201ENST00000456044 356 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 RPS27P29-201ENST00000463110 252 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 AC010401.1-201ENST00000463867 348 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 AP000873.1-201ENST00000463987 400 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 SYPL1P1-201ENST00000473622 768 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 AC021205.2-201ENST00000480069 347 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 AC020699.1-201ENST00000505161 445 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 SLC2A13P1-201ENST00000531560 322 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 AP003385.6-201ENST00000531603 374 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 UBE2NP1-201ENST00000545592 458 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 HIGD1AP17-201ENST00000554576 276 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms