Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.69□□□□□ -1.82
LDB1Q86U70 CR381670.1-201ENST00000624291 1693 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.69□□□□□ -1.82
LDB1Q86U70 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LDB1Q86U70 SNORA7.2-201ENST00000364446 145 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 RNU6-343P-201ENST00000364709 104 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 RNU6-723P-201ENST00000383973 107 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
LDB1Q86U70 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.69□□□□□ -1.82
LDB1Q86U70 RPL32P23-201ENST00000397237 405 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LDB1Q86U70 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LDB1Q86U70 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.69□□□□□ -1.82
LDB1Q86U70 HMGB3P20-201ENST00000417997 600 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 RPL17P36-201ENST00000420302 549 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 AL591419.1-201ENST00000427423 339 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.69□□□□□ -1.82
LDB1Q86U70 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.69□□□□□ -1.82
LDB1Q86U70 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.69□□□□□ -1.82
LDB1Q86U70 RPL21P112-201ENST00000434403 463 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.69□□□□□ -1.82
LDB1Q86U70 AL133217.1-201ENST00000450980 425 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 AL353691.1-201ENST00000451332 387 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.69□□□□□ -1.82
LDB1Q86U70 AL672167.3-201ENST00000465951 960 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 FTH1P2-201ENST00000466086 412 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 AC104563.1-201ENST00000476147 376 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 NIPA2P2-201ENST00000496376 1083 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.69□□□□□ -1.82
LDB1Q86U70 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.69□□□□□ -1.82
LDB1Q86U70 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.69□□□□□ -1.82
LDB1Q86U70 RNA5SP164-201ENST00000516533 110 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 RN7SKP209-201ENST00000516888 304 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LDB1Q86U70 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.69□□□□□ -1.82
LDB1Q86U70 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.69□□□□□ -1.82
LDB1Q86U70 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.69□□□□□ -1.82
LDB1Q86U70 AC006960.3-201ENST00000561845 705 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 AC136618.2-201ENST00000575091 400 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 MIR5685-201ENST00000579080 79 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 AC090186.1-201ENST00000605991 572 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 AC005344.1-201ENST00000613391 459 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 AL356596.1-201ENST00000624230 379 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 AC097655.1-201ENST00000635075 318 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 CRYM-AS1-204ENST00000637983 556 ntBASIC3.69□□□□□ -1.82
LDB1Q86U70 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LDB1Q86U70 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
LDB1Q86U70 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.69□□□□□ -1.82
LDB1Q86U70 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LDB1Q86U70 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
LDB1Q86U70 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LDB1Q86U70 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LDB1Q86U70 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
LDB1Q86U70 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.69□□□□□ -1.82
LDB1Q86U70 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.69□□□□□ -1.82
LDB1Q86U70 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LDB1Q86U70 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LDB1Q86U70 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LDB1Q86U70 AC007656.2-201ENST00000624902 4547 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 AP004289.2-201ENST00000444413 1457 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 AL365440.1-201ENST00000436135 2167 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
LDB1Q86U70 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
LDB1Q86U70 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.68□□□□□ -1.82
LDB1Q86U70 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LDB1Q86U70 Y_RNA.126-201ENST00000363382 111 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 RNU6-289P-201ENST00000364093 107 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 RNA5SP235-201ENST00000365411 114 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.68□□□□□ -1.82
LDB1Q86U70 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LDB1Q86U70 MIR320C1-201ENST00000408566 88 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 RN7SKP156-201ENST00000410308 342 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LDB1Q86U70 RAD23BP2-201ENST00000416003 1207 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 MTND1P20-201ENST00000430341 950 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.68□□□□□ -1.82
LDB1Q86U70 MTCYBP45-201ENST00000435243 565 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 UBE2FP3-201ENST00000436366 524 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.68□□□□□ -1.82
LDB1Q86U70 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
LDB1Q86U70 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.68□□□□□ -1.82
LDB1Q86U70 SETD6P1-201ENST00000444575 317 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.68□□□□□ -1.82
LDB1Q86U70 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.68□□□□□ -1.82
LDB1Q86U70 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.68□□□□□ -1.82
LDB1Q86U70 ART2BP-201ENST00000453501 499 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 ARPC3P2-201ENST00000457786 533 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 AP000563.1-201ENST00000490865 758 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 AC010486.2-201ENST00000505572 483 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.68□□□□□ -1.82
LDB1Q86U70 AC093809.1-201ENST00000509155 340 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.68□□□□□ -1.82
LDB1Q86U70 MTND1P22-201ENST00000510572 951 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 LTV1P1-201ENST00000510683 1237 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 NPM1P41-201ENST00000512920 831 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 AC026402.1-201ENST00000513642 170 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 AP004242.1-201ENST00000533701 349 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 AC023161.2-201ENST00000551218 780 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms