Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AC011451.2-201ENST00000604303 598 ntBASIC5.19□□□□□ -1.58
SSRP1Q08945 AC004067.1-201ENST00000608733 700 ntBASIC5.19□□□□□ -1.58
SSRP1Q08945 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SSRP1Q08945 AP005019.3-201ENST00000620418 560 ntBASIC5.19□□□□□ -1.58
SSRP1Q08945 MIR7703-201ENST00000620784 77 ntBASIC5.19□□□□□ -1.58
SSRP1Q08945 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC5.19□□□□□ -1.58
SSRP1Q08945 AC139792.3-201ENST00000623525 224 ntBASIC5.19□□□□□ -1.58
SSRP1Q08945 AC112204.3-201ENST00000623822 332 ntBASIC5.19□□□□□ -1.58
SSRP1Q08945 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.19□□□□□ -1.58
SSRP1Q08945 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SSRP1Q08945 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.18□□□□□ -1.58
SSRP1Q08945 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSRP1Q08945 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.18□□□□□ -1.58
SSRP1Q08945 MTCO1P24-201ENST00000515438 1558 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.18□□□□□ -1.58
SSRP1Q08945 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSRP1Q08945 RNU4-44P-201ENST00000363050 141 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 RNY1P12-201ENST00000364251 105 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 RNA5SP505-201ENST00000364748 108 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
SSRP1Q08945 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SSRP1Q08945 Y_RNA.390-201ENST00000383932 102 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SSRP1Q08945 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSRP1Q08945 USP9YP27-201ENST00000418455 438 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 ELOCP4-201ENST00000420090 333 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5.18□□□□□ -1.58
SSRP1Q08945 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC5.18□□□□□ -1.58
SSRP1Q08945 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 FTH1P1-201ENST00000437933 532 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 MTCO3P18-201ENST00000440206 761 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 AL662791.1-201ENST00000441992 928 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 AC011753.3-201ENST00000443436 406 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 H2AFZP6-201ENST00000444403 394 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 AL590399.6-201ENST00000446396 307 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 RPL23AP20-201ENST00000447965 421 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 RPL29P29-201ENST00000448725 423 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 AC012158.1-204ENST00000483430 465 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.18□□□□□ -1.58
SSRP1Q08945 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.18□□□□□ -1.58
SSRP1Q08945 AC090151.1-201ENST00000520784 730 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.18□□□□□ -1.58
SSRP1Q08945 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.18□□□□□ -1.58
SSRP1Q08945 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.18□□□□□ -1.58
SSRP1Q08945 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.18□□□□□ -1.58
SSRP1Q08945 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.18□□□□□ -1.58
SSRP1Q08945 AC084783.1-201ENST00000565846 910 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 AC025678.1-201ENST00000567861 338 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 SLC25A36P1-201ENST00000590111 465 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 KC877982.1-201ENST00000602313 470 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 AC010201.1-201ENST00000605051 540 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 AC006065.6-201ENST00000625201 545 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 AC099654.14-201ENST00000638599 341 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 AL049555.1-201ENST00000562834 1933 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSRP1Q08945 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSRP1Q08945 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SSRP1Q08945 AC012618.3-205ENST00000637896 1496 ntBASIC5.18□□□□□ -1.58
SSRP1Q08945 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.18□□□□□ -1.58
SSRP1Q08945 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
SSRP1Q08945 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.17□□□□□ -1.58
SSRP1Q08945 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSRP1Q08945 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SSRP1Q08945 FAM91A3P-201ENST00000456826 2544 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.17□□□□□ -1.58
SSRP1Q08945 MFSD8-242ENST00000641690 4199 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 RNU6-1090P-201ENST00000364065 94 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 RNU5A-8P-201ENST00000364102 114 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.17□□□□□ -1.58
SSRP1Q08945 Y_RNA.481-201ENST00000384373 102 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 RNU1-44P-201ENST00000384453 163 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 RPL7P60-201ENST00000397636 735 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 SNRPFP1-201ENST00000414761 252 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 HMGB3P20-201ENST00000417997 600 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.17□□□□□ -1.58
SSRP1Q08945 AC007283.2-201ENST00000424739 197 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 MTCO1P20-201ENST00000425366 358 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 AC137499.1-201ENST00000427602 88 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.17□□□□□ -1.58
SSRP1Q08945 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.17□□□□□ -1.58
SSRP1Q08945 TIMM9P1-201ENST00000436122 256 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 HMGB1P31-201ENST00000437242 427 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.17□□□□□ -1.58
SSRP1Q08945 MTND6P18-201ENST00000439477 513 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 RAC1P7-201ENST00000445367 377 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5.17□□□□□ -1.58
SSRP1Q08945 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.17□□□□□ -1.58
SSRP1Q08945 RN7SL41P-201ENST00000476144 297 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 RN7SL817P-201ENST00000480777 288 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 AC008897.1-201ENST00000494006 347 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 AK3P4-201ENST00000504283 583 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.17□□□□□ -1.58
SSRP1Q08945 AC017037.2-201ENST00000513850 890 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.17□□□□□ -1.58
SSRP1Q08945 RNA5SP337-201ENST00000517007 109 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC5.17□□□□□ -1.58
SSRP1Q08945 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.17□□□□□ -1.58
SSRP1Q08945 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.17□□□□□ -1.58
SSRP1Q08945 AC022616.3-201ENST00000523940 148 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms