Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AP002906.1-201ENST00000603405 233 ntBASIC3.12□□□□□ -1.91
CDH6P55285 AC012468.1-201ENST00000604888 430 ntBASIC3.12□□□□□ -1.91
CDH6P55285 AC006329.2-201ENST00000611491 394 ntBASIC3.12□□□□□ -1.91
CDH6P55285 AL162574.2-201ENST00000614618 657 ntBASIC3.12□□□□□ -1.91
CDH6P55285 AC091948.2-201ENST00000636510 279 ntBASIC3.12□□□□□ -1.91
CDH6P55285 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
CDH6P55285 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDH6P55285 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDH6P55285 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH6P55285 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDH6P55285 RNU6-115P-201ENST00000364310 107 ntBASIC3.11□□□□□ -1.91
CDH6P55285 MTCO2P31-201ENST00000402702 684 ntBASIC3.11□□□□□ -1.91
CDH6P55285 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.11□□□□□ -1.91
CDH6P55285 AL133384.1-201ENST00000412744 351 ntBASIC3.11□□□□□ -1.91
CDH6P55285 YPEL5P1-201ENST00000419731 367 ntBASIC3.11□□□□□ -1.91
CDH6P55285 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.11□□□□□ -1.91
CDH6P55285 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH6P55285 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH6P55285 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH6P55285 RPL23AP16-201ENST00000441715 421 ntBASIC3.11□□□□□ -1.91
CDH6P55285 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.11□□□□□ -1.91
CDH6P55285 PRELID3BP6-201ENST00000503839 571 ntBASIC3.11□□□□□ -1.91
CDH6P55285 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDH6P55285 AC008885.1-201ENST00000514930 301 ntBASIC3.11□□□□□ -1.91
CDH6P55285 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH6P55285 ARL2BPP5-201ENST00000523141 481 ntBASIC3.11□□□□□ -1.91
CDH6P55285 AP000790.1-201ENST00000528891 737 ntBASIC3.11□□□□□ -1.91
CDH6P55285 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.11□□□□□ -1.91
CDH6P55285 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH6P55285 MTCO1P40-201ENST00000574371 625 ntBASIC3.11□□□□□ -1.91
CDH6P55285 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH6P55285 MIR5195-201ENST00000583555 115 ntBASIC3.11□□□□□ -1.91
CDH6P55285 SNORD39.3-201ENST00000584451 71 ntBASIC3.11□□□□□ -1.91
CDH6P55285 AC012493.2-201ENST00000595083 291 ntBASIC3.11□□□□□ -1.91
CDH6P55285 AL360181.4-201ENST00000621752 134 ntBASIC3.11□□□□□ -1.91
CDH6P55285 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH6P55285 MIR3651-201ENST00000630427 90 ntBASIC3.11□□□□□ -1.91
CDH6P55285 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDH6P55285 AC139713.2-210ENST00000641741 992 ntBASIC3.11□□□□□ -1.91
CDH6P55285 AC073346.2-201ENST00000624724 2058 ntBASIC3.11□□□□□ -1.91
CDH6P55285 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDH6P55285 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CDH6P55285 AC111188.2-201ENST00000529697 1387 ntBASIC3.11□□□□□ -1.91
CDH6P55285 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDH6P55285 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDH6P55285 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDH6P55285 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDH6P55285 RNU6-609P-201ENST00000365459 107 ntBASIC3.1□□□□□ -1.91
CDH6P55285 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CDH6P55285 RNU6-932P-201ENST00000391108 106 ntBASIC3.1□□□□□ -1.91
CDH6P55285 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.1□□□□□ -1.91
CDH6P55285 RN7SKP220-201ENST00000410611 288 ntBASIC3.1□□□□□ -1.91
CDH6P55285 AC109780.2-201ENST00000413467 845 ntBASIC3.1□□□□□ -1.91
CDH6P55285 MRPL50P2-201ENST00000416821 482 ntBASIC3.1□□□□□ -1.91
CDH6P55285 DUTP6-201ENST00000425573 462 ntBASIC3.1□□□□□ -1.91
CDH6P55285 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH6P55285 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH6P55285 SETP8-201ENST00000435341 628 ntBASIC3.1□□□□□ -1.91
CDH6P55285 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH6P55285 RABEPKP1-201ENST00000440529 1026 ntBASIC3.1□□□□□ -1.91
CDH6P55285 AL050341.1-201ENST00000447743 313 ntBASIC3.1□□□□□ -1.91
CDH6P55285 NDUFA5P7-201ENST00000452914 242 ntBASIC3.1□□□□□ -1.91
CDH6P55285 MTCO3P2-201ENST00000457365 171 ntBASIC3.1□□□□□ -1.91
CDH6P55285 RPS20P24-201ENST00000457473 361 ntBASIC3.1□□□□□ -1.91
CDH6P55285 RPS23P3-201ENST00000470993 430 ntBASIC3.1□□□□□ -1.91
CDH6P55285 AC117440.1-201ENST00000474107 571 ntBASIC3.1□□□□□ -1.91
CDH6P55285 AC017015.1-201ENST00000477387 286 ntBASIC3.1□□□□□ -1.91
CDH6P55285 AC108860.1-201ENST00000484521 383 ntBASIC3.1□□□□□ -1.91
CDH6P55285 AC068724.1-201ENST00000487100 792 ntBASIC3.1□□□□□ -1.91
CDH6P55285 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH6P55285 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH6P55285 ARL4AP2-201ENST00000507378 601 ntBASIC3.1□□□□□ -1.91
CDH6P55285 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH6P55285 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDH6P55285 AC121161.1-201ENST00000510606 652 ntBASIC3.1□□□□□ -1.91
CDH6P55285 SNORD59.2-201ENST00000516873 68 ntBASIC3.1□□□□□ -1.91
CDH6P55285 OR8K2P-201ENST00000524645 927 ntBASIC3.1□□□□□ -1.91
CDH6P55285 PSMA2P1-201ENST00000526365 646 ntBASIC3.1□□□□□ -1.91
CDH6P55285 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH6P55285 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH6P55285 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH6P55285 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH6P55285 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.1□□□□□ -1.91
CDH6P55285 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH6P55285 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.1□□□□□ -1.91
CDH6P55285 AC009318.4-201ENST00000620496 486 ntBASIC3.1□□□□□ -1.91
CDH6P55285 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.1□□□□□ -1.91
CDH6P55285 MIR8057-201ENST00000620957 69 ntBASIC3.1□□□□□ -1.91
CDH6P55285 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH6P55285 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH6P55285 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH6P55285 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH6P55285 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH6P55285 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CDH6P55285 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CDH6P55285 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH6P55285 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDH6P55285 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDH6P55285 RNA5SP374-201ENST00000362939 125 ntBASIC3.09□□□□□ -1.91
CDH6P55285 SNORA71.1-201ENST00000364523 117 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms