Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
SRP9P49458 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.37□□□□□ -2.03
SRP9P49458 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.37□□□□□ -2.03
SRP9P49458 ZNF271P-202ENST00000465539 1970 ntBASIC2.37□□□□□ -2.03
SRP9P49458 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.36□□□□□ -2.03
SRP9P49458 PABPC1P9-201ENST00000426076 1612 ntBASIC2.36□□□□□ -2.03
SRP9P49458 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.36□□□□□ -2.03
SRP9P49458 RNA5SP181-201ENST00000410246 98 ntBASIC2.36□□□□□ -2.03
SRP9P49458 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.36□□□□□ -2.03
SRP9P49458 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.36□□□□□ -2.03
SRP9P49458 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.36□□□□□ -2.03
SRP9P49458 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.36□□□□□ -2.03
SRP9P49458 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.36□□□□□ -2.03
SRP9P49458 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.36□□□□□ -2.03
SRP9P49458 RPS15AP7-201ENST00000439294 405 ntBASIC2.36□□□□□ -2.03
SRP9P49458 AL135938.1-201ENST00000443141 297 ntBASIC2.36□□□□□ -2.03
SRP9P49458 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.36□□□□□ -2.03
SRP9P49458 RPL31P53-201ENST00000457065 348 ntBASIC2.36□□□□□ -2.03
SRP9P49458 AC015908.1-201ENST00000478739 476 ntBASIC2.36□□□□□ -2.03
SRP9P49458 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.36□□□□□ -2.03
SRP9P49458 AC091826.1-201ENST00000514065 313 ntBASIC2.36□□□□□ -2.03
SRP9P49458 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.36□□□□□ -2.03
SRP9P49458 OR7K1P-201ENST00000546439 926 ntBASIC2.36□□□□□ -2.03
SRP9P49458 AC093014.1-201ENST00000548926 724 ntBASIC2.36□□□□□ -2.03
SRP9P49458 MIR548Y-201ENST00000582739 110 ntBASIC2.36□□□□□ -2.03
SRP9P49458 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.36□□□□□ -2.03
SRP9P49458 MIR7106-201ENST00000612419 65 ntBASIC2.36□□□□□ -2.03
SRP9P49458 AC011890.2-201ENST00000613393 294 ntBASIC2.36□□□□□ -2.03
SRP9P49458 AC006386.2-201ENST00000624491 75 ntBASIC2.36□□□□□ -2.03
SRP9P49458 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.36□□□□□ -2.03
SRP9P49458 AC012005.1-201ENST00000624575 75 ntBASIC2.36□□□□□ -2.03
SRP9P49458 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SRP9P49458 AC135776.4-201ENST00000624300 1904 ntBASIC2.36□□□□□ -2.03
SRP9P49458 PABPC1P7-201ENST00000413177 1513 ntBASIC2.36□□□□□ -2.03
SRP9P49458 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SRP9P49458 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SRP9P49458 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
SRP9P49458 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SRP9P49458 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
SRP9P49458 SNORA67.1-201ENST00000364749 141 ntBASIC2.35□□□□□ -2.03
SRP9P49458 RNU6-1293P-201ENST00000384077 107 ntBASIC2.35□□□□□ -2.03
SRP9P49458 RNA5SP210-201ENST00000391034 120 ntBASIC2.35□□□□□ -2.03
SRP9P49458 NDUFB4P4-201ENST00000404822 243 ntBASIC2.35□□□□□ -2.03
SRP9P49458 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.35□□□□□ -2.03
SRP9P49458 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SRP9P49458 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.35□□□□□ -2.03
SRP9P49458 CR769767.1-201ENST00000436337 346 ntBASIC2.35□□□□□ -2.03
SRP9P49458 AC105272.1-201ENST00000438604 198 ntBASIC2.35□□□□□ -2.03
SRP9P49458 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.35□□□□□ -2.03
SRP9P49458 AC023424.2-201ENST00000493479 777 ntBASIC2.35□□□□□ -2.03
SRP9P49458 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.35□□□□□ -2.03
SRP9P49458 RNU1-104P-201ENST00000517280 175 ntBASIC2.35□□□□□ -2.03
SRP9P49458 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC2.35□□□□□ -2.03
SRP9P49458 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.35□□□□□ -2.03
SRP9P49458 AC018755.4-201ENST00000619715 454 ntBASIC2.35□□□□□ -2.03
SRP9P49458 RNU6-156P-201ENST00000621869 107 ntBASIC2.35□□□□□ -2.03
SRP9P49458 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.35□□□□□ -2.03
SRP9P49458 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC2.35□□□□□ -2.03
SRP9P49458 AC109315.1-201ENST00000584143 1347 ntBASIC2.35□□□□□ -2.03
SRP9P49458 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SRP9P49458 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SRP9P49458 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SRP9P49458 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SRP9P49458 SNORA18.3-201ENST00000384122 132 ntBASIC2.34□□□□□ -2.03
SRP9P49458 MIR144-201ENST00000384886 86 ntBASIC2.34□□□□□ -2.03
SRP9P49458 RNA5SP252-201ENST00000391131 119 ntBASIC2.34□□□□□ -2.03
SRP9P49458 U3.26-201ENST00000391236 204 ntBASIC2.34□□□□□ -2.03
SRP9P49458 AL138827.1-201ENST00000402666 306 ntBASIC2.34□□□□□ -2.03
SRP9P49458 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SRP9P49458 RPS20P25-201ENST00000412447 352 ntBASIC2.34□□□□□ -2.03
SRP9P49458 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.34□□□□□ -2.03
SRP9P49458 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.34□□□□□ -2.03
SRP9P49458 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.34□□□□□ -2.03
SRP9P49458 AC112653.1-201ENST00000443851 386 ntBASIC2.34□□□□□ -2.03
SRP9P49458 RNA5SP310-201ENST00000459084 116 ntBASIC2.34□□□□□ -2.03
SRP9P49458 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.34□□□□□ -2.03
SRP9P49458 AC026801.2-201ENST00000515352 425 ntBASIC2.34□□□□□ -2.03
SRP9P49458 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.34□□□□□ -2.03
SRP9P49458 ACTR3BP3-201ENST00000565577 979 ntBASIC2.34□□□□□ -2.03
SRP9P49458 MYL12BP1-201ENST00000569826 507 ntBASIC2.34□□□□□ -2.03
SRP9P49458 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.34□□□□□ -2.03
SRP9P49458 GLUD1P4-201ENST00000590914 418 ntBASIC2.34□□□□□ -2.03
SRP9P49458 AC008739.2-201ENST00000597006 317 ntBASIC2.34□□□□□ -2.03
SRP9P49458 U73023.1-201ENST00000603134 700 ntBASIC2.34□□□□□ -2.03
SRP9P49458 AC245517.5-201ENST00000611529 162 ntBASIC2.34□□□□□ -2.03
SRP9P49458 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SRP9P49458 MIR6076-201ENST00000617521 113 ntBASIC2.34□□□□□ -2.03
SRP9P49458 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.34□□□□□ -2.03
SRP9P49458 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
SRP9P49458 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
SRP9P49458 AL512283.1-201ENST00000606756 1384 ntBASIC2.34□□□□□ -2.04
SRP9P49458 AC011460.1-201ENST00000636268 1834 ntBASIC2.33□□□□□ -2.04
SRP9P49458 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SRP9P49458 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
SRP9P49458 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
SRP9P49458 MIR6073-201ENST00000352083 89 ntBASIC2.33□□□□□ -2.04
SRP9P49458 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SRP9P49458 RNA5SP21-201ENST00000410917 96 ntBASIC2.33□□□□□ -2.04
SRP9P49458 AC080125.1-201ENST00000414888 684 ntBASIC2.33□□□□□ -2.04
SRP9P49458 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms