Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC008687.2-201ENST00000597865 520 ntBASIC2.82□□□□□ -1.96
CXCL12P48061 BNIP3P4-201ENST00000604946 565 ntBASIC2.82□□□□□ -1.96
CXCL12P48061 AC022509.4-201ENST00000621404 572 ntBASIC2.82□□□□□ -1.96
CXCL12P48061 MIR7843-201ENST00000622274 79 ntBASIC2.82□□□□□ -1.96
CXCL12P48061 AC064859.1-201ENST00000624741 174 ntBASIC2.82□□□□□ -1.96
CXCL12P48061 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.82□□□□□ -1.96
CXCL12P48061 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CXCL12P48061 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CXCL12P48061 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
CXCL12P48061 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CXCL12P48061 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CXCL12P48061 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CXCL12P48061 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CXCL12P48061 AP000567.1-201ENST00000406413 156 ntBASIC2.81□□□□□ -1.96
CXCL12P48061 U3.42-201ENST00000408746 214 ntBASIC2.81□□□□□ -1.96
CXCL12P48061 NUP35P2-201ENST00000416748 943 ntBASIC2.81□□□□□ -1.96
CXCL12P48061 GLRXP1-201ENST00000423261 334 ntBASIC2.81□□□□□ -1.96
CXCL12P48061 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.81□□□□□ -1.96
CXCL12P48061 AL158053.1-201ENST00000441503 453 ntBASIC2.81□□□□□ -1.96
CXCL12P48061 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.81□□□□□ -1.96
CXCL12P48061 AC112653.1-201ENST00000443851 386 ntBASIC2.81□□□□□ -1.96
CXCL12P48061 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.81□□□□□ -1.96
CXCL12P48061 FDX1P2-201ENST00000450769 375 ntBASIC2.81□□□□□ -1.96
CXCL12P48061 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.81□□□□□ -1.96
CXCL12P48061 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.81□□□□□ -1.96
CXCL12P48061 GTF2IP12-201ENST00000456547 356 ntBASIC2.81□□□□□ -1.96
CXCL12P48061 AC008379.1-201ENST00000463655 464 ntBASIC2.81□□□□□ -1.96
CXCL12P48061 RPS4XP6-201ENST00000477670 797 ntBASIC2.81□□□□□ -1.96
CXCL12P48061 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.81□□□□□ -1.96
CXCL12P48061 ARL2BPP6-201ENST00000512757 439 ntBASIC2.81□□□□□ -1.96
CXCL12P48061 RNA5SP148-201ENST00000516527 94 ntBASIC2.81□□□□□ -1.96
CXCL12P48061 RN7SKP96-201ENST00000516948 297 ntBASIC2.81□□□□□ -1.96
CXCL12P48061 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CXCL12P48061 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.81□□□□□ -1.96
CXCL12P48061 AL512310.1-201ENST00000548639 172 ntBASIC2.81□□□□□ -1.96
CXCL12P48061 OR4T1P-201ENST00000554933 911 ntBASIC2.81□□□□□ -1.96
CXCL12P48061 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.81□□□□□ -1.96
CXCL12P48061 AC023824.3-201ENST00000569003 562 ntBASIC2.81□□□□□ -1.96
CXCL12P48061 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.81□□□□□ -1.96
CXCL12P48061 AC011468.4-201ENST00000603942 409 ntBASIC2.81□□□□□ -1.96
CXCL12P48061 AC091488.1-201ENST00000604239 660 ntBASIC2.81□□□□□ -1.96
CXCL12P48061 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.81□□□□□ -1.96
CXCL12P48061 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.81□□□□□ -1.96
CXCL12P48061 AC021851.1-201ENST00000608537 1082 ntBASIC2.81□□□□□ -1.96
CXCL12P48061 AC112503.2-201ENST00000609005 552 ntBASIC2.81□□□□□ -1.96
CXCL12P48061 AC005156.1-201ENST00000613371 573 ntBASIC2.81□□□□□ -1.96
CXCL12P48061 AL356118.1-201ENST00000635272 1078 ntBASIC2.81□□□□□ -1.96
CXCL12P48061 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.81□□□□□ -1.96
CXCL12P48061 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CXCL12P48061 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CXCL12P48061 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CXCL12P48061 XPOTP1-201ENST00000443317 2398 ntBASIC2.81□□□□□ -1.96
CXCL12P48061 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CXCL12P48061 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
CXCL12P48061 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.8□□□□□ -1.96
CXCL12P48061 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.8□□□□□ -1.96
CXCL12P48061 OR56A5-201ENST00000340110 738 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 MIR153-1-201ENST00000384914 90 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 MIR525-201ENST00000384978 85 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CXCL12P48061 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CXCL12P48061 AP002784.2-201ENST00000397300 549 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 RNA5SP107-201ENST00000411358 122 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.8□□□□□ -1.96
CXCL12P48061 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 RPS15AP40-201ENST00000419621 391 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 AC006960.1-201ENST00000419980 153 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 RPS15AP6-201ENST00000420703 385 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 AC246680.2-201ENST00000422106 389 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 FO393414.1-201ENST00000428697 1184 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 AL512637.2-201ENST00000431287 1256 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.8□□□□□ -1.96
CXCL12P48061 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.8□□□□□ -1.96
CXCL12P48061 RAB11AP1-201ENST00000442978 646 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 HSFY3P-201ENST00000444242 1191 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 AL929288.2-201ENST00000446368 407 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 AL096829.2-201ENST00000446582 742 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 HMGN2P21-201ENST00000447764 270 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.8□□□□□ -1.96
CXCL12P48061 AC010401.1-201ENST00000463867 348 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CXCL12P48061 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.8□□□□□ -1.96
CXCL12P48061 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CXCL12P48061 RPS27P23-201ENST00000487608 251 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 RN7SL633P-201ENST00000488974 297 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 RNU1-143P-201ENST00000516296 146 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 RN7SKP234-201ENST00000517173 224 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.8□□□□□ -1.96
CXCL12P48061 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.8□□□□□ -1.96
CXCL12P48061 AF279873.1-201ENST00000523393 313 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.8□□□□□ -1.96
CXCL12P48061 SERPINE4P-201ENST00000554978 281 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.8□□□□□ -1.96
CXCL12P48061 RNA5SP108-201ENST00000605921 117 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 AC090425.2-201ENST00000608818 501 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 AP005229.2-201ENST00000609980 697 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 U1.23-201ENST00000610293 146 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 RNU1-68P-201ENST00000615382 146 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 AC068722.2-201ENST00000618734 544 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms