Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 OR1S2-201ENST00000302592 978 ntBASIC3.33□□□□□ -1.88
SSR1P43307 TAF9BP1-201ENST00000396646 746 ntBASIC3.33□□□□□ -1.88
SSR1P43307 ATP5F1P3-201ENST00000397213 657 ntBASIC3.33□□□□□ -1.88
SSR1P43307 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
SSR1P43307 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.33□□□□□ -1.88
SSR1P43307 RNA5SP56-201ENST00000410277 118 ntBASIC3.33□□□□□ -1.88
SSR1P43307 OR51A3P-201ENST00000413596 924 ntBASIC3.33□□□□□ -1.88
SSR1P43307 AC092017.2-201ENST00000427600 362 ntBASIC3.33□□□□□ -1.88
SSR1P43307 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.33□□□□□ -1.88
SSR1P43307 snoU13.3-201ENST00000459441 104 ntBASIC3.33□□□□□ -1.88
SSR1P43307 RPL32P14-201ENST00000463196 378 ntBASIC3.33□□□□□ -1.88
SSR1P43307 RNF138P1-201ENST00000502765 546 ntBASIC3.33□□□□□ -1.88
SSR1P43307 AC104057.1-201ENST00000515547 497 ntBASIC3.33□□□□□ -1.88
SSR1P43307 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.33□□□□□ -1.88
SSR1P43307 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.33□□□□□ -1.88
SSR1P43307 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.33□□□□□ -1.88
SSR1P43307 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.33□□□□□ -1.88
SSR1P43307 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.33□□□□□ -1.88
SSR1P43307 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.33□□□□□ -1.88
SSR1P43307 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.33□□□□□ -1.88
SSR1P43307 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.33□□□□□ -1.88
SSR1P43307 AC103881.1-201ENST00000603476 538 ntBASIC3.33□□□□□ -1.88
SSR1P43307 AC009464.1-201ENST00000615731 469 ntBASIC3.33□□□□□ -1.88
SSR1P43307 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.33□□□□□ -1.88
SSR1P43307 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SSR1P43307 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SSR1P43307 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
SSR1P43307 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.33□□□□□ -1.88
SSR1P43307 AC093831.2-201ENST00000624393 3427 ntBASIC3.32□□□□□ -1.88
SSR1P43307 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SSR1P43307 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SSR1P43307 RNU1-33P-201ENST00000364249 162 ntBASIC3.32□□□□□ -1.88
SSR1P43307 RNU6-353P-201ENST00000364266 108 ntBASIC3.32□□□□□ -1.88
SSR1P43307 RNA5SP139-201ENST00000364340 117 ntBASIC3.32□□□□□ -1.88
SSR1P43307 SNORD21-201ENST00000383953 95 ntBASIC3.32□□□□□ -1.88
SSR1P43307 RNU6-339P-201ENST00000384310 107 ntBASIC3.32□□□□□ -1.88
SSR1P43307 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SSR1P43307 AL513477.1-202ENST00000417061 214 ntBASIC3.32□□□□□ -1.88
SSR1P43307 OFD1P18Y-201ENST00000420889 959 ntBASIC3.32□□□□□ -1.88
SSR1P43307 AL645937.1-202ENST00000421799 937 ntBASIC3.32□□□□□ -1.88
SSR1P43307 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.32□□□□□ -1.88
SSR1P43307 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.32□□□□□ -1.88
SSR1P43307 DEFB130D-201ENST00000426866 237 ntBASIC3.32□□□□□ -1.88
SSR1P43307 AC011242.1-201ENST00000433596 1158 ntBASIC3.32□□□□□ -1.88
SSR1P43307 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SSR1P43307 HMGB3P6-201ENST00000444896 598 ntBASIC3.32□□□□□ -1.88
SSR1P43307 AL031183.1-201ENST00000457667 207 ntBASIC3.32□□□□□ -1.88
SSR1P43307 AC008155.2-201ENST00000464337 397 ntBASIC3.32□□□□□ -1.88
SSR1P43307 AC078857.1-201ENST00000469870 667 ntBASIC3.32□□□□□ -1.88
SSR1P43307 RPS27AP9-201ENST00000477681 438 ntBASIC3.32□□□□□ -1.88
SSR1P43307 AC121161.1-201ENST00000510606 652 ntBASIC3.32□□□□□ -1.88
SSR1P43307 AC026412.2-201ENST00000512270 1075 ntBASIC3.32□□□□□ -1.88
SSR1P43307 MTND5P4-201ENST00000514978 288 ntBASIC3.32□□□□□ -1.88
SSR1P43307 SNORA67.7-201ENST00000516664 135 ntBASIC3.32□□□□□ -1.88
SSR1P43307 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.32□□□□□ -1.88
SSR1P43307 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.32□□□□□ -1.88
SSR1P43307 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.32□□□□□ -1.88
SSR1P43307 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.32□□□□□ -1.88
SSR1P43307 AC092474.3-201ENST00000603022 568 ntBASIC3.32□□□□□ -1.88
SSR1P43307 AC140725.3-201ENST00000616193 880 ntBASIC3.32□□□□□ -1.88
SSR1P43307 AC068620.4-201ENST00000636730 1182 ntBASIC3.32□□□□□ -1.88
SSR1P43307 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SSR1P43307 MTND5P31-201ENST00000419366 1374 ntBASIC3.32□□□□□ -1.88
SSR1P43307 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.32□□□□□ -1.88
SSR1P43307 AL161431.1-201ENST00000618966 4205 ntBASIC3.32□□□□□ -1.88
SSR1P43307 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SSR1P43307 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSR1P43307 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
SSR1P43307 AC026241.1-201ENST00000517873 2142 ntBASIC3.31□□□□□ -1.88
SSR1P43307 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
SSR1P43307 ZNF734P-201ENST00000419494 1534 ntBASIC3.31□□□□□ -1.88
SSR1P43307 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSR1P43307 AC111188.2-201ENST00000529697 1387 ntBASIC3.31□□□□□ -1.88
SSR1P43307 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSR1P43307 RNVU1-3-201ENST00000364313 161 ntBASIC3.31□□□□□ -1.88
SSR1P43307 RPL22P22-201ENST00000395439 379 ntBASIC3.31□□□□□ -1.88
SSR1P43307 RNU2-25P-201ENST00000411041 191 ntBASIC3.31□□□□□ -1.88
SSR1P43307 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.31□□□□□ -1.88
SSR1P43307 AC245054.2-201ENST00000415639 319 ntBASIC3.31□□□□□ -1.88
SSR1P43307 RPS7P15-201ENST00000415804 584 ntBASIC3.31□□□□□ -1.88
SSR1P43307 RPL21P32-201ENST00000419877 477 ntBASIC3.31□□□□□ -1.88
SSR1P43307 RPL31P54-201ENST00000429803 370 ntBASIC3.31□□□□□ -1.88
SSR1P43307 AC091862.1-201ENST00000438016 1100 ntBASIC3.31□□□□□ -1.88
SSR1P43307 AC108734.1-201ENST00000439549 399 ntBASIC3.31□□□□□ -1.88
SSR1P43307 GSTA11P-201ENST00000452866 669 ntBASIC3.31□□□□□ -1.88
SSR1P43307 CDC42P1-201ENST00000456658 548 ntBASIC3.31□□□□□ -1.88
SSR1P43307 BTF3P5-201ENST00000457252 467 ntBASIC3.31□□□□□ -1.88
SSR1P43307 RPS4XP10-201ENST00000465034 731 ntBASIC3.31□□□□□ -1.88
SSR1P43307 AC103975.1-201ENST00000482506 483 ntBASIC3.31□□□□□ -1.88
SSR1P43307 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.31□□□□□ -1.88
SSR1P43307 RPPH1-2P-201ENST00000516688 293 ntBASIC3.31□□□□□ -1.88
SSR1P43307 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.31□□□□□ -1.88
SSR1P43307 AP000790.1-201ENST00000528891 737 ntBASIC3.31□□□□□ -1.88
SSR1P43307 AC087481.2-201ENST00000565492 330 ntBASIC3.31□□□□□ -1.88
SSR1P43307 BPTFP1-201ENST00000579209 492 ntBASIC3.31□□□□□ -1.88
SSR1P43307 MIR2682-201ENST00000580305 110 ntBASIC3.31□□□□□ -1.88
SSR1P43307 AC022069.1-201ENST00000582910 658 ntBASIC3.31□□□□□ -1.88
SSR1P43307 PRELID3BP8-201ENST00000604148 295 ntBASIC3.31□□□□□ -1.88
SSR1P43307 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.31□□□□□ -1.88
SSR1P43307 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms