Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 MTND4LP7-201ENST00000431728 294 ntBASIC2.97□□□□□ -1.93
SCN4AP35499 AL606490.7-201ENST00000433136 191 ntBASIC2.97□□□□□ -1.93
SCN4AP35499 HMGB1P25-201ENST00000468402 607 ntBASIC2.97□□□□□ -1.93
SCN4AP35499 TRAV31-201ENST00000502780 342 ntBASIC2.97□□□□□ -1.93
SCN4AP35499 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.97□□□□□ -1.93
SCN4AP35499 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.97□□□□□ -1.93
SCN4AP35499 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.97□□□□□ -1.93
SCN4AP35499 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.97□□□□□ -1.93
SCN4AP35499 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.97□□□□□ -1.93
SCN4AP35499 AC242628.1-201ENST00000606810 391 ntBASIC2.97□□□□□ -1.93
SCN4AP35499 AC107308.1-201ENST00000615897 301 ntBASIC2.97□□□□□ -1.93
SCN4AP35499 AC009452.1-201ENST00000640823 606 ntBASIC2.97□□□□□ -1.93
SCN4AP35499 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.97□□□□□ -1.93
SCN4AP35499 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.96□□□□□ -1.94
SCN4AP35499 AC080125.1-201ENST00000414888 684 ntBASIC2.96□□□□□ -1.94
SCN4AP35499 MORF4L1P6-201ENST00000418771 268 ntBASIC2.96□□□□□ -1.94
SCN4AP35499 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.96□□□□□ -1.94
SCN4AP35499 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SCN4AP35499 RPL21P41-201ENST00000459863 264 ntBASIC2.96□□□□□ -1.94
SCN4AP35499 RPL23AP45-201ENST00000476406 468 ntBASIC2.96□□□□□ -1.94
SCN4AP35499 RPL9P33-201ENST00000484311 566 ntBASIC2.96□□□□□ -1.94
SCN4AP35499 ELOCP31-201ENST00000540463 467 ntBASIC2.96□□□□□ -1.94
SCN4AP35499 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.96□□□□□ -1.94
SCN4AP35499 RPL23AP84-201ENST00000571193 464 ntBASIC2.96□□□□□ -1.94
SCN4AP35499 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.96□□□□□ -1.94
SCN4AP35499 PSMA6P4-201ENST00000603247 718 ntBASIC2.96□□□□□ -1.94
SCN4AP35499 KATNBL1P1-201ENST00000605192 748 ntBASIC2.96□□□□□ -1.94
SCN4AP35499 AL355816.1-201ENST00000607951 118 ntBASIC2.96□□□□□ -1.94
SCN4AP35499 AL136981.2-201ENST00000617319 734 ntBASIC2.96□□□□□ -1.94
SCN4AP35499 FRG1DP-201ENST00000635586 771 ntBASIC2.96□□□□□ -1.94
SCN4AP35499 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC2.96□□□□□ -1.94
SCN4AP35499 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SCN4AP35499 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SCN4AP35499 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SCN4AP35499 SNORA27.3-201ENST00000364937 134 ntBASIC2.96□□□□□ -1.94
SCN4AP35499 U8.9-201ENST00000365667 134 ntBASIC2.96□□□□□ -1.94
SCN4AP35499 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.96□□□□□ -1.94
SCN4AP35499 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SCN4AP35499 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SCN4AP35499 TRGV6-201ENST00000417928 299 ntBASIC2.96□□□□□ -1.94
SCN4AP35499 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.96□□□□□ -1.94
SCN4AP35499 XKRY2-201ENST00000442362 1093 ntBASIC2.96□□□□□ -1.94
SCN4AP35499 RPL7P52-201ENST00000449200 742 ntBASIC2.96□□□□□ -1.94
SCN4AP35499 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC2.96□□□□□ -1.94
SCN4AP35499 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.96□□□□□ -1.94
SCN4AP35499 RNA5SP309-201ENST00000516670 106 ntBASIC2.96□□□□□ -1.94
SCN4AP35499 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.96□□□□□ -1.94
SCN4AP35499 AC083760.1-201ENST00000589621 670 ntBASIC2.96□□□□□ -1.94
SCN4AP35499 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.96□□□□□ -1.94
SCN4AP35499 AC025016.1-201ENST00000616746 682 ntBASIC2.96□□□□□ -1.94
SCN4AP35499 AL353997.5-201ENST00000618886 171 ntBASIC2.96□□□□□ -1.94
SCN4AP35499 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.95□□□□□ -1.94
SCN4AP35499 AC138915.3-201ENST00000562908 1389 ntBASIC2.95□□□□□ -1.94
SCN4AP35499 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.95□□□□□ -1.94
SCN4AP35499 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SCN4AP35499 RNU6-1159P-201ENST00000362933 107 ntBASIC2.95□□□□□ -1.94
SCN4AP35499 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SCN4AP35499 RNA5SP129-201ENST00000410276 118 ntBASIC2.95□□□□□ -1.94
SCN4AP35499 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SCN4AP35499 MTND2P3-201ENST00000452458 470 ntBASIC2.95□□□□□ -1.94
SCN4AP35499 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.95□□□□□ -1.94
SCN4AP35499 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SCN4AP35499 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.95□□□□□ -1.94
SCN4AP35499 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SCN4AP35499 AC009318.2-201ENST00000610917 651 ntBASIC2.95□□□□□ -1.94
SCN4AP35499 AC009318.3-201ENST00000616916 503 ntBASIC2.95□□□□□ -1.94
SCN4AP35499 AL162233.1-201ENST00000620014 944 ntBASIC2.95□□□□□ -1.94
SCN4AP35499 MIR6873-201ENST00000622788 63 ntBASIC2.95□□□□□ -1.94
SCN4AP35499 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SCN4AP35499 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SCN4AP35499 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
SCN4AP35499 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.95□□□□□ -1.94
SCN4AP35499 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.94□□□□□ -1.94
SCN4AP35499 AC092447.7-201ENST00000422212 1621 ntBASIC2.94□□□□□ -1.94
SCN4AP35499 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SCN4AP35499 RNU1-100P-201ENST00000365255 165 ntBASIC2.94□□□□□ -1.94
SCN4AP35499 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.94□□□□□ -1.94
SCN4AP35499 Y_RNA.595-201ENST00000410403 105 ntBASIC2.94□□□□□ -1.94
SCN4AP35499 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.94□□□□□ -1.94
SCN4AP35499 NDUFA5P10-201ENST00000432147 357 ntBASIC2.94□□□□□ -1.94
SCN4AP35499 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.94□□□□□ -1.94
SCN4AP35499 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.94□□□□□ -1.94
SCN4AP35499 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.94□□□□□ -1.94
SCN4AP35499 AC010265.1-201ENST00000513509 211 ntBASIC2.94□□□□□ -1.94
SCN4AP35499 AC018630.1-201ENST00000541376 925 ntBASIC2.94□□□□□ -1.94
SCN4AP35499 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.94□□□□□ -1.94
SCN4AP35499 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.94□□□□□ -1.94
SCN4AP35499 AC012414.2-201ENST00000559474 187 ntBASIC2.94□□□□□ -1.94
SCN4AP35499 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.94□□□□□ -1.94
SCN4AP35499 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.94□□□□□ -1.94
SCN4AP35499 MTCO2P22-201ENST00000603246 681 ntBASIC2.94□□□□□ -1.94
SCN4AP35499 AP000942.3-201ENST00000603702 160 ntBASIC2.94□□□□□ -1.94
SCN4AP35499 AC073111.2-201ENST00000605657 1075 ntBASIC2.94□□□□□ -1.94
SCN4AP35499 AC023813.4-201ENST00000607580 580 ntBASIC2.94□□□□□ -1.94
SCN4AP35499 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.94□□□□□ -1.94
SCN4AP35499 AL020991.1-201ENST00000612314 373 ntBASIC2.94□□□□□ -1.94
SCN4AP35499 CR381653.2-201ENST00000624041 768 ntBASIC2.94□□□□□ -1.94
SCN4AP35499 AC104820.1-201ENST00000624183 307 ntBASIC2.94□□□□□ -1.94
SCN4AP35499 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SCN4AP35499 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms