Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SLC6A4P31645 AC068724.3-201ENST00000625906 87 ntBASIC4.5□□□□□ -1.69
SLC6A4P31645 AC140479.6-201ENST00000633535 357 ntBASIC4.5□□□□□ -1.69
SLC6A4P31645 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC6A4P31645 AC099654.14-201ENST00000638599 341 ntBASIC4.5□□□□□ -1.69
SLC6A4P31645 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC6A4P31645 AC092125.1-201ENST00000562568 1995 ntBASIC4.5□□□□□ -1.69
SLC6A4P31645 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
SLC6A4P31645 AP001273.1-201ENST00000624493 3152 ntBASIC4.5□□□□□ -1.69
SLC6A4P31645 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
SLC6A4P31645 NUP58P1-201ENST00000502546 1738 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.49□□□□□ -1.69
SLC6A4P31645 AC009951.1-201ENST00000623674 2614 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SLC6A4P31645 ASNSP1-201ENST00000518311 1939 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
SLC6A4P31645 Y_RNA.1-201ENST00000352915 104 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 RNA5SP258-201ENST00000362750 119 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 RNA5SP479-201ENST00000364858 117 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 RNU6-359P-201ENST00000365466 108 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 MIR23A-201ENST00000385245 73 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 RPL23AP32-201ENST00000395315 459 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.49□□□□□ -1.69
SLC6A4P31645 CCNG1P1-201ENST00000406783 885 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC6A4P31645 RN7SKP247-201ENST00000411094 308 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.49□□□□□ -1.69
SLC6A4P31645 MTND3P17-201ENST00000416968 344 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.49□□□□□ -1.69
SLC6A4P31645 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC6A4P31645 PSMA6P3-201ENST00000428242 164 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 OR4F13P-201ENST00000428478 931 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 AC002486.1-201ENST00000435098 391 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SLC6A4P31645 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.49□□□□□ -1.69
SLC6A4P31645 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC6A4P31645 RPL7P52-201ENST00000449200 742 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 NUTF2P7-201ENST00000453086 375 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC6A4P31645 RN7SL817P-201ENST00000480777 288 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 AC091167.1-201ENST00000492017 396 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 RN7SL691P-201ENST00000494487 301 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.49□□□□□ -1.69
SLC6A4P31645 FAM92A1P2-202ENST00000504766 877 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.49□□□□□ -1.69
SLC6A4P31645 AC074344.1-201ENST00000512823 224 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 Vault.3-201ENST00000516676 95 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC6A4P31645 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.49□□□□□ -1.69
SLC6A4P31645 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.49□□□□□ -1.69
SLC6A4P31645 AP005205.1-201ENST00000563503 508 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.49□□□□□ -1.69
SLC6A4P31645 AC009101.1-201ENST00000568135 242 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 MIR3160-1-201ENST00000577972 85 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.49□□□□□ -1.69
SLC6A4P31645 AC012417.1-201ENST00000582307 1039 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 BNIP3P33-201ENST00000598912 569 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 AL445567.2-201ENST00000618935 498 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 AC007546.1-201ENST00000619452 559 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SLC6A4P31645 AL596275.2-204ENST00000641628 552 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 AL596275.2-206ENST00000641957 626 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC6A4P31645 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
SLC6A4P31645 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SLC6A4P31645 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
SLC6A4P31645 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SLC6A4P31645 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC6A4P31645 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.49□□□□□ -1.69
SLC6A4P31645 AC093535.2-201ENST00000624769 2326 ntBASIC4.49□□□□□ -1.69
SLC6A4P31645 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SLC6A4P31645 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.48□□□□□ -1.69
SLC6A4P31645 MFSD8-242ENST00000641690 4199 ntBASIC4.48□□□□□ -1.69
SLC6A4P31645 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SLC6A4P31645 AC006971.1-201ENST00000407916 4486 ntBASIC4.48□□□□□ -1.69
SLC6A4P31645 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SLC6A4P31645 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SLC6A4P31645 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SLC6A4P31645 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SLC6A4P31645 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
SLC6A4P31645 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SLC6A4P31645 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SLC6A4P31645 RNA5SP388-201ENST00000362584 119 ntBASIC4.48□□□□□ -1.69
SLC6A4P31645 RNA5SP366-201ENST00000365454 123 ntBASIC4.48□□□□□ -1.69
SLC6A4P31645 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SLC6A4P31645 Y_RNA.481-201ENST00000384373 102 ntBASIC4.48□□□□□ -1.69
SLC6A4P31645 RNU6-114P-201ENST00000384704 105 ntBASIC4.48□□□□□ -1.69
SLC6A4P31645 CALM2P3-201ENST00000400429 449 ntBASIC4.48□□□□□ -1.69
SLC6A4P31645 FGF7P8-201ENST00000402994 292 ntBASIC4.48□□□□□ -1.69
SLC6A4P31645 RPS3AP24-201ENST00000407896 734 ntBASIC4.48□□□□□ -1.69
SLC6A4P31645 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.48□□□□□ -1.69
SLC6A4P31645 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SLC6A4P31645 RPL23AP26-201ENST00000412728 464 ntBASIC4.48□□□□□ -1.69
SLC6A4P31645 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.48□□□□□ -1.69
SLC6A4P31645 USP9YP6-201ENST00000413550 854 ntBASIC4.48□□□□□ -1.69
SLC6A4P31645 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.48□□□□□ -1.69
SLC6A4P31645 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.48□□□□□ -1.69
SLC6A4P31645 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.48□□□□□ -1.69
SLC6A4P31645 MTND6P18-201ENST00000439477 513 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms