Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.09□□□□□ -1.75
TNFSF4P23510 UBE2FP2-201ENST00000566646 462 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.09□□□□□ -1.75
TNFSF4P23510 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.09□□□□□ -1.75
TNFSF4P23510 MIR4737-201ENST00000583979 81 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 AC022726.1-201ENST00000587475 207 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.09□□□□□ -1.75
TNFSF4P23510 AL161729.4-201ENST00000604650 476 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 AC090425.2-201ENST00000608818 501 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 AL161734.1-201ENST00000609720 557 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 Mico1.1-201ENST00000611698 204 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.09□□□□□ -1.75
TNFSF4P23510 AC100827.5-201ENST00000615883 426 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 SNHG22-203ENST00000617833 660 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 AL732618.1-201ENST00000623251 301 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 AL359740.1-201ENST00000624340 592 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.09□□□□□ -1.75
TNFSF4P23510 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
TNFSF4P23510 MFSD8-242ENST00000641690 4199 ntBASIC4.09□□□□□ -1.75
TNFSF4P23510 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
TNFSF4P23510 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
TNFSF4P23510 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TNFSF4P23510 AC010733.2-201ENST00000589496 5702 ntBASIC4.09□□□□□ -1.76
TNFSF4P23510 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.09□□□□□ -1.76
TNFSF4P23510 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
TNFSF4P23510 ZFRP1-201ENST00000457579 2970 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.08□□□□□ -1.76
TNFSF4P23510 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TNFSF4P23510 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TNFSF4P23510 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TNFSF4P23510 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.08□□□□□ -1.76
TNFSF4P23510 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TNFSF4P23510 RNU6-1284P-201ENST00000363701 100 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 U3.11-201ENST00000364476 212 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TNFSF4P23510 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TNFSF4P23510 Y_RNA.517-201ENST00000384551 106 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TNFSF4P23510 RPS3AP36-201ENST00000398190 775 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 RN7SKP267-201ENST00000410381 285 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 BX510359.2-201ENST00000417920 305 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 ELOCP4-201ENST00000420090 333 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.08□□□□□ -1.76
TNFSF4P23510 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.08□□□□□ -1.76
TNFSF4P23510 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.08□□□□□ -1.76
TNFSF4P23510 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.08□□□□□ -1.76
TNFSF4P23510 AC104850.1-201ENST00000435940 476 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.08□□□□□ -1.76
TNFSF4P23510 AC016831.4-201ENST00000438302 307 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.08□□□□□ -1.76
TNFSF4P23510 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.08□□□□□ -1.76
TNFSF4P23510 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.08□□□□□ -1.76
TNFSF4P23510 AL359385.1-201ENST00000456509 365 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 TLK1P1-201ENST00000456760 2440 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TNFSF4P23510 AC007537.2-201ENST00000472093 511 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 RPS27AP1-201ENST00000475545 471 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 RBM43P1-201ENST00000476891 1081 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.08□□□□□ -1.76
TNFSF4P23510 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.08□□□□□ -1.76
TNFSF4P23510 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.08□□□□□ -1.76
TNFSF4P23510 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TNFSF4P23510 AL359273.1-201ENST00000510918 627 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 GMPSP1-201ENST00000514075 579 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.08□□□□□ -1.76
TNFSF4P23510 RN7SKP289-201ENST00000517244 295 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 DUXAP2-201ENST00000519198 589 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.08□□□□□ -1.76
TNFSF4P23510 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.08□□□□□ -1.76
TNFSF4P23510 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.08□□□□□ -1.76
TNFSF4P23510 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.08□□□□□ -1.76
TNFSF4P23510 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.08□□□□□ -1.76
TNFSF4P23510 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.08□□□□□ -1.76
TNFSF4P23510 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.08□□□□□ -1.76
TNFSF4P23510 AP001880.2-201ENST00000538233 448 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 AL352979.3-201ENST00000553515 247 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.08□□□□□ -1.76
TNFSF4P23510 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.08□□□□□ -1.76
TNFSF4P23510 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.08□□□□□ -1.76
TNFSF4P23510 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.08□□□□□ -1.76
TNFSF4P23510 AL391840.1-201ENST00000571144 367 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 RPL23AP84-201ENST00000571193 464 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 MIR4480-201ENST00000582492 71 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.08□□□□□ -1.76
TNFSF4P23510 AC068790.5-201ENST00000602741 355 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 AL391358.1-201ENST00000605342 190 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 FAM25E-202ENST00000608562 189 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 AC087241.4-201ENST00000612441 480 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TNFSF4P23510 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.08□□□□□ -1.76
TNFSF4P23510 AL136313.1-201ENST00000624804 202 ntBASIC4.08□□□□□ -1.76
TNFSF4P23510 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
TNFSF4P23510 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
TNFSF4P23510 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.07□□□□□ -1.76
TNFSF4P23510 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.07□□□□□ -1.76
TNFSF4P23510 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.07□□□□□ -1.76
TNFSF4P23510 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TNFSF4P23510 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms