Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.59□□□□□ -1.52
NFKB1P19838 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NFKB1P19838 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NFKB1P19838 PANDAR-201ENST00000629595 1506 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.58□□□□□ -1.52
NFKB1P19838 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
NFKB1P19838 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NFKB1P19838 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NFKB1P19838 AC005005.4-201ENST00000623789 16698 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.58□□□□□ -1.52
NFKB1P19838 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NFKB1P19838 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
NFKB1P19838 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.58□□□□□ -1.52
NFKB1P19838 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.58□□□□□ -1.52
NFKB1P19838 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NFKB1P19838 RNA5SP122-201ENST00000384457 108 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
NFKB1P19838 PPIAP9-201ENST00000403866 498 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 AL445189.1-201ENST00000405722 338 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.58□□□□□ -1.52
NFKB1P19838 RPLP0P7-201ENST00000416050 667 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.58□□□□□ -1.52
NFKB1P19838 AL590632.1-201ENST00000424289 371 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 RPS29P14-201ENST00000431518 171 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.58□□□□□ -1.52
NFKB1P19838 CYCSP24-201ENST00000445119 316 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.58□□□□□ -1.52
NFKB1P19838 HMGB3P30-201ENST00000457863 606 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 AC090686.1-201ENST00000481577 749 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 UBA52P7-201ENST00000486088 380 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.58□□□□□ -1.52
NFKB1P19838 FTH1P9-201ENST00000513251 355 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.58□□□□□ -1.52
NFKB1P19838 RNU6-1069P-201ENST00000516612 133 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.58□□□□□ -1.52
NFKB1P19838 RANP3-201ENST00000530970 276 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.58□□□□□ -1.52
NFKB1P19838 AL121576.1-201ENST00000556055 276 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.58□□□□□ -1.52
NFKB1P19838 AC008521.2-201ENST00000591021 259 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 AC016727.2-201ENST00000603988 621 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 AC015982.1-201ENST00000608113 465 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 AC010632.3-201ENST00000611377 369 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.58□□□□□ -1.52
NFKB1P19838 AC243312.2-201ENST00000623340 601 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NFKB1P19838 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NFKB1P19838 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
NFKB1P19838 AC011978.2-201ENST00000569835 2054 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NFKB1P19838 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NFKB1P19838 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
NFKB1P19838 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.58□□□□□ -1.52
NFKB1P19838 EXOC5P1-201ENST00000510543 1969 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 MTCO1P24-201ENST00000515438 1558 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NFKB1P19838 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.58□□□□□ -1.52
NFKB1P19838 AC091812.1-201ENST00000432235 1948 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NFKB1P19838 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.58□□□□□ -1.52
NFKB1P19838 AC093671.1-201ENST00000624981 2929 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 AC100757.1-201ENST00000616872 1835 ntBASIC5.58□□□□□ -1.52
NFKB1P19838 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
NFKB1P19838 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NFKB1P19838 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NFKB1P19838 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.57□□□□□ -1.52
NFKB1P19838 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.57□□□□□ -1.52
NFKB1P19838 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.57□□□□□ -1.52
NFKB1P19838 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
NFKB1P19838 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NFKB1P19838 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NFKB1P19838 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NFKB1P19838 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NFKB1P19838 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NFKB1P19838 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NFKB1P19838 Y_RNA.380-201ENST00000365663 111 ntBASIC5.57□□□□□ -1.52
NFKB1P19838 RHOT1P2-201ENST00000366423 333 ntBASIC5.57□□□□□ -1.52
NFKB1P19838 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
NFKB1P19838 Y_RNA.399-201ENST00000383955 105 ntBASIC5.57□□□□□ -1.52
NFKB1P19838 RPL7P37-201ENST00000425095 738 ntBASIC5.57□□□□□ -1.52
NFKB1P19838 AC009965.2-201ENST00000425328 970 ntBASIC5.57□□□□□ -1.52
NFKB1P19838 USMG5P1-201ENST00000425964 177 ntBASIC5.57□□□□□ -1.52
NFKB1P19838 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.57□□□□□ -1.52
NFKB1P19838 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.57□□□□□ -1.52
NFKB1P19838 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.57□□□□□ -1.52
NFKB1P19838 HIGD1AP11-201ENST00000438361 280 ntBASIC5.57□□□□□ -1.52
NFKB1P19838 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NFKB1P19838 RPS17P13-201ENST00000448974 407 ntBASIC5.57□□□□□ -1.52
NFKB1P19838 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.57□□□□□ -1.52
NFKB1P19838 AC002553.2-201ENST00000453217 340 ntBASIC5.57□□□□□ -1.52
NFKB1P19838 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.57□□□□□ -1.52
NFKB1P19838 snoU13.7-201ENST00000459220 104 ntBASIC5.57□□□□□ -1.52
NFKB1P19838 AC092324.1-201ENST00000468671 324 ntBASIC5.57□□□□□ -1.52
NFKB1P19838 AC104472.2-201ENST00000469035 601 ntBASIC5.57□□□□□ -1.52
NFKB1P19838 AC022493.2-201ENST00000506122 481 ntBASIC5.57□□□□□ -1.52
NFKB1P19838 SLC25A15P5-201ENST00000508033 253 ntBASIC5.57□□□□□ -1.52
NFKB1P19838 TBCAP3-201ENST00000512475 312 ntBASIC5.57□□□□□ -1.52
NFKB1P19838 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms