Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC005046.1-201ENST00000608515 625 ntBASIC2.85□□□□□ -1.95
APOEP02649 AC006249.1-201ENST00000621223 471 ntBASIC2.85□□□□□ -1.95
APOEP02649 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.85□□□□□ -1.95
APOEP02649 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.85□□□□□ -1.95
APOEP02649 FRG1DP-201ENST00000635586 771 ntBASIC2.85□□□□□ -1.95
APOEP02649 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
APOEP02649 METTL21EP-201ENST00000298105 713 ntBASIC2.84□□□□□ -1.95
APOEP02649 RNU6-50P-201ENST00000362356 103 ntBASIC2.84□□□□□ -1.95
APOEP02649 AL512633.1-201ENST00000399931 655 ntBASIC2.84□□□□□ -1.95
APOEP02649 AL121972.1-201ENST00000402023 252 ntBASIC2.84□□□□□ -1.95
APOEP02649 RNU6-1077P-201ENST00000410506 102 ntBASIC2.84□□□□□ -1.95
APOEP02649 AL513175.1-201ENST00000431492 780 ntBASIC2.84□□□□□ -1.95
APOEP02649 Z96811.1-201ENST00000445880 108 ntBASIC2.84□□□□□ -1.95
APOEP02649 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.84□□□□□ -1.95
APOEP02649 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.84□□□□□ -1.95
APOEP02649 AC104472.2-201ENST00000469035 601 ntBASIC2.84□□□□□ -1.95
APOEP02649 AC010301.1-201ENST00000473936 355 ntBASIC2.84□□□□□ -1.95
APOEP02649 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.84□□□□□ -1.95
APOEP02649 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.84□□□□□ -1.95
APOEP02649 RNA5SP468-201ENST00000516782 93 ntBASIC2.84□□□□□ -1.95
APOEP02649 SNORA31.21-201ENST00000517180 77 ntBASIC2.84□□□□□ -1.95
APOEP02649 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.84□□□□□ -1.95
APOEP02649 CIR1P1-201ENST00000524055 1133 ntBASIC2.84□□□□□ -1.95
APOEP02649 AC079600.2-201ENST00000550076 130 ntBASIC2.84□□□□□ -1.95
APOEP02649 MIR4504-201ENST00000577413 92 ntBASIC2.84□□□□□ -1.95
APOEP02649 AF131215.7-201ENST00000602443 707 ntBASIC2.84□□□□□ -1.95
APOEP02649 AC073111.2-201ENST00000605657 1075 ntBASIC2.84□□□□□ -1.95
APOEP02649 AC006963.1-201ENST00000624003 1052 ntBASIC2.84□□□□□ -1.95
APOEP02649 AC024023.1-201ENST00000624530 922 ntBASIC2.84□□□□□ -1.95
APOEP02649 AC079228.1-201ENST00000624774 1049 ntBASIC2.84□□□□□ -1.95
APOEP02649 AC090897.3-201ENST00000636973 1157 ntBASIC2.84□□□□□ -1.95
APOEP02649 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
APOEP02649 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.84□□□□□ -1.96
APOEP02649 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
APOEP02649 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
APOEP02649 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.83□□□□□ -1.96
APOEP02649 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
APOEP02649 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
APOEP02649 RNU6-374P-201ENST00000364146 108 ntBASIC2.83□□□□□ -1.96
APOEP02649 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
APOEP02649 MIR9-1-201ENST00000385198 89 ntBASIC2.83□□□□□ -1.96
APOEP02649 MIR1289-1-201ENST00000408836 144 ntBASIC2.83□□□□□ -1.96
APOEP02649 AC092638.1-201ENST00000411966 1275 ntBASIC2.83□□□□□ -1.96
APOEP02649 BX682237.1-201ENST00000415016 335 ntBASIC2.83□□□□□ -1.96
APOEP02649 RAD23BP2-201ENST00000416003 1207 ntBASIC2.83□□□□□ -1.96
APOEP02649 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.83□□□□□ -1.96
APOEP02649 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.83□□□□□ -1.96
APOEP02649 RPL36P19-201ENST00000430744 301 ntBASIC2.83□□□□□ -1.96
APOEP02649 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.83□□□□□ -1.96
APOEP02649 AC005002.1-201ENST00000447458 540 ntBASIC2.83□□□□□ -1.96
APOEP02649 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.83□□□□□ -1.96
APOEP02649 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.83□□□□□ -1.96
APOEP02649 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
APOEP02649 SETP12-201ENST00000514068 805 ntBASIC2.83□□□□□ -1.96
APOEP02649 RNA5SP356-201ENST00000515972 94 ntBASIC2.83□□□□□ -1.96
APOEP02649 RN7SKP132-201ENST00000516001 208 ntBASIC2.83□□□□□ -1.96
APOEP02649 RNU1-103P-201ENST00000516502 125 ntBASIC2.83□□□□□ -1.96
APOEP02649 AL133271.1-201ENST00000538229 291 ntBASIC2.83□□□□□ -1.96
APOEP02649 AC007954.1-201ENST00000554198 494 ntBASIC2.83□□□□□ -1.96
APOEP02649 AL355836.1-201ENST00000555951 870 ntBASIC2.83□□□□□ -1.96
APOEP02649 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.83□□□□□ -1.96
APOEP02649 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.83□□□□□ -1.96
APOEP02649 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.83□□□□□ -1.96
APOEP02649 VN1R90P-201ENST00000595717 726 ntBASIC2.83□□□□□ -1.96
APOEP02649 SUMO2P14-201ENST00000604488 293 ntBASIC2.83□□□□□ -1.96
APOEP02649 AC245100.7-201ENST00000609678 442 ntBASIC2.83□□□□□ -1.96
APOEP02649 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.83□□□□□ -1.96
APOEP02649 AL110115.1-201ENST00000614396 364 ntBASIC2.83□□□□□ -1.96
APOEP02649 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
APOEP02649 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.83□□□□□ -1.96
APOEP02649 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
APOEP02649 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
APOEP02649 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.83□□□□□ -1.96
APOEP02649 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
APOEP02649 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
APOEP02649 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
APOEP02649 RNU4-23P-201ENST00000362839 140 ntBASIC2.82□□□□□ -1.96
APOEP02649 RNU1-112P-201ENST00000364401 164 ntBASIC2.82□□□□□ -1.96
APOEP02649 MIR142-201ENST00000384835 87 ntBASIC2.82□□□□□ -1.96
APOEP02649 AL360182.1-201ENST00000397433 468 ntBASIC2.82□□□□□ -1.96
APOEP02649 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.82□□□□□ -1.96
APOEP02649 RNU4-78P-201ENST00000410940 126 ntBASIC2.82□□□□□ -1.96
APOEP02649 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.82□□□□□ -1.96
APOEP02649 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.82□□□□□ -1.96
APOEP02649 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.82□□□□□ -1.96
APOEP02649 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.82□□□□□ -1.96
APOEP02649 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.82□□□□□ -1.96
APOEP02649 RPL23AP15-201ENST00000450202 459 ntBASIC2.82□□□□□ -1.96
APOEP02649 snoU13.3-201ENST00000459441 104 ntBASIC2.82□□□□□ -1.96
APOEP02649 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.82□□□□□ -1.96
APOEP02649 SNORA31.15-201ENST00000516771 132 ntBASIC2.82□□□□□ -1.96
APOEP02649 HAUS1P3-201ENST00000523909 662 ntBASIC2.82□□□□□ -1.96
APOEP02649 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.82□□□□□ -1.96
APOEP02649 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.82□□□□□ -1.96
APOEP02649 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC2.82□□□□□ -1.96
APOEP02649 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.82□□□□□ -1.96
APOEP02649 AC004486.1-201ENST00000546846 233 ntBASIC2.82□□□□□ -1.96
APOEP02649 AL442163.2-201ENST00000553912 710 ntBASIC2.82□□□□□ -1.96
APOEP02649 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.82□□□□□ -1.96
APOEP02649 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms