Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.55□□□□□ -2
UPK1BO75841 RNU6-1095P-201ENST00000516148 108 ntBASIC2.55□□□□□ -2
UPK1BO75841 PAICSP4-201ENST00000517543 1253 ntBASIC2.55□□□□□ -2
UPK1BO75841 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.55□□□□□ -2
UPK1BO75841 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.55□□□□□ -2
UPK1BO75841 AC090502.2-201ENST00000549267 280 ntBASIC2.55□□□□□ -2
UPK1BO75841 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.55□□□□□ -2
UPK1BO75841 LARP7P2-201ENST00000575306 125 ntBASIC2.55□□□□□ -2
UPK1BO75841 MIR4276-201ENST00000584832 70 ntBASIC2.55□□□□□ -2
UPK1BO75841 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.55□□□□□ -2
UPK1BO75841 RPAP2P1-201ENST00000603626 1168 ntBASIC2.55□□□□□ -2
UPK1BO75841 AP000238.1-201ENST00000608759 426 ntBASIC2.55□□□□□ -2
UPK1BO75841 AL512506.1-201ENST00000613918 449 ntBASIC2.55□□□□□ -2
UPK1BO75841 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.55□□□□□ -2
UPK1BO75841 AP000346.3-201ENST00000622821 210 ntBASIC2.55□□□□□ -2
UPK1BO75841 AL512506.2-201ENST00000624472 458 ntBASIC2.55□□□□□ -2
UPK1BO75841 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.55□□□□□ -2
UPK1BO75841 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.54□□□□□ -2
UPK1BO75841 AC011460.1-201ENST00000636268 1834 ntBASIC2.54□□□□□ -2
UPK1BO75841 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.54□□□□□ -2
UPK1BO75841 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.54□□□□□ -2
UPK1BO75841 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.54□□□□□ -2
UPK1BO75841 SNORA70C-201ENST00000384538 135 ntBASIC2.54□□□□□ -2
UPK1BO75841 MIR512-1-201ENST00000384913 84 ntBASIC2.54□□□□□ -2
UPK1BO75841 TMSB4XP8-201ENST00000402089 135 ntBASIC2.54□□□□□ -2
UPK1BO75841 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.54□□□□□ -2
UPK1BO75841 TMSB4XP6-201ENST00000415187 135 ntBASIC2.54□□□□□ -2
UPK1BO75841 AC092634.6-201ENST00000418558 192 ntBASIC2.54□□□□□ -2
UPK1BO75841 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.54□□□□□ -2
UPK1BO75841 AC245028.1-201ENST00000423259 256 ntBASIC2.54□□□□□ -2
UPK1BO75841 TMSB4XP1-201ENST00000424567 135 ntBASIC2.54□□□□□ -2
UPK1BO75841 MTCYBP32-201ENST00000427945 1084 ntBASIC2.54□□□□□ -2
UPK1BO75841 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.54□□□□□ -2
UPK1BO75841 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC2.54□□□□□ -2
UPK1BO75841 AC000041.1-201ENST00000439655 175 ntBASIC2.54□□□□□ -2
UPK1BO75841 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.54□□□□□ -2
UPK1BO75841 MOB1AP2-201ENST00000446060 614 ntBASIC2.54□□□□□ -2
UPK1BO75841 MTCO1P48-201ENST00000448024 1096 ntBASIC2.54□□□□□ -2
UPK1BO75841 AL589880.1-201ENST00000448271 287 ntBASIC2.54□□□□□ -2
UPK1BO75841 RBMY2UP-201ENST00000453474 324 ntBASIC2.54□□□□□ -2
UPK1BO75841 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.54□□□□□ -2
UPK1BO75841 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC2.54□□□□□ -2
UPK1BO75841 HMGN1P11-201ENST00000508668 303 ntBASIC2.54□□□□□ -2
UPK1BO75841 SNORA31.1-201ENST00000515993 133 ntBASIC2.54□□□□□ -2
UPK1BO75841 SNORA31.5-201ENST00000516190 133 ntBASIC2.54□□□□□ -2
UPK1BO75841 SNORA48.10-201ENST00000516965 160 ntBASIC2.54□□□□□ -2
UPK1BO75841 AP001804.3-201ENST00000525146 880 ntBASIC2.54□□□□□ -2
UPK1BO75841 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.54□□□□□ -2
UPK1BO75841 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.54□□□□□ -2
UPK1BO75841 AC008127.2-201ENST00000549925 1075 ntBASIC2.54□□□□□ -2
UPK1BO75841 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
UPK1BO75841 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.54□□□□□ -2
UPK1BO75841 AC060766.3-201ENST00000591442 263 ntBASIC2.54□□□□□ -2
UPK1BO75841 PRELID3BP8-201ENST00000604148 295 ntBASIC2.54□□□□□ -2
UPK1BO75841 AC106791.2-201ENST00000604680 391 ntBASIC2.54□□□□□ -2
UPK1BO75841 AC073387.2-201ENST00000604797 784 ntBASIC2.54□□□□□ -2
UPK1BO75841 AC092954.1-201ENST00000609121 445 ntBASIC2.54□□□□□ -2
UPK1BO75841 AP005137.2-201ENST00000609238 400 ntBASIC2.54□□□□□ -2
UPK1BO75841 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.54□□□□□ -2
UPK1BO75841 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.54□□□□□ -2
UPK1BO75841 PACRG-211ENST00000621363 360 ntTSL 5 BASIC2.54□□□□□ -2
UPK1BO75841 MIR6730-201ENST00000622213 67 ntBASIC2.54□□□□□ -2
UPK1BO75841 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.54□□□□□ -2
UPK1BO75841 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
UPK1BO75841 MAPK10-322ENST00000641485 4530 ntBASIC2.54□□□□□ -2
UPK1BO75841 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.54□□□□□ -2
UPK1BO75841 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.53□□□□□ -2
UPK1BO75841 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.53□□□□□ -2
UPK1BO75841 GDI2P1-201ENST00000429312 1336 ntBASIC2.53□□□□□ -2
UPK1BO75841 ZNF271P-202ENST00000465539 1970 ntBASIC2.53□□□□□ -2
UPK1BO75841 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
UPK1BO75841 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
UPK1BO75841 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
UPK1BO75841 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.53□□□□□ -2
UPK1BO75841 SNORA14A-201ENST00000364773 135 ntBASIC2.53□□□□□ -2
UPK1BO75841 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
UPK1BO75841 RNU6-549P-201ENST00000384433 107 ntBASIC2.53□□□□□ -2
UPK1BO75841 MIR217-201ENST00000384817 110 ntBASIC2.53□□□□□ -2
UPK1BO75841 MCTS2P-201ENST00000394552 546 ntBASIC2.53□□□□□ -2
UPK1BO75841 TANK-203ENST00000402568 878 ntTSL 5 BASIC2.53□□□□□ -2
UPK1BO75841 RNU2-15P-201ENST00000410692 191 ntBASIC2.53□□□□□ -2
UPK1BO75841 HMGN1P24-201ENST00000412282 298 ntBASIC2.53□□□□□ -2
UPK1BO75841 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.53□□□□□ -2
UPK1BO75841 RPS15AP38-201ENST00000413110 372 ntBASIC2.53□□□□□ -2
UPK1BO75841 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
UPK1BO75841 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.53□□□□□ -2
UPK1BO75841 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.53□□□□□ -2
UPK1BO75841 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.53□□□□□ -2
UPK1BO75841 AL117339.2-201ENST00000430475 180 ntBASIC2.53□□□□□ -2
UPK1BO75841 RPL23AP74-201ENST00000437246 471 ntBASIC2.53□□□□□ -2
UPK1BO75841 AC241584.1-201ENST00000438469 1241 ntBASIC2.53□□□□□ -2
UPK1BO75841 AC122718.1-201ENST00000439448 744 ntBASIC2.53□□□□□ -2
UPK1BO75841 RPL21P89-201ENST00000444021 467 ntBASIC2.53□□□□□ -2
UPK1BO75841 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.53□□□□□ -2
UPK1BO75841 AC009961.3-201ENST00000449832 765 ntBASIC2.53□□□□□ -2
UPK1BO75841 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.53□□□□□ -2
UPK1BO75841 AL031183.1-201ENST00000457667 207 ntBASIC2.53□□□□□ -2
UPK1BO75841 snoU109.4-201ENST00000458953 143 ntBASIC2.53□□□□□ -2
UPK1BO75841 AC020898.1-201ENST00000474167 787 ntBASIC2.53□□□□□ -2
UPK1BO75841 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms